RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 NUP85Q9BW27 656 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CHORDC1Q9UHD1 332 aaPredicted RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 FAM153AQ9UHL3 310 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CNTN6Q9UQ52 1028 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 RNF40O75150 1001 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CALCAP01258 141 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 COMTP21964 271 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CUL1Q13616 776 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CUL2Q13617 745 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CLUL1Q15846 466 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 TMEM63BQ5T3F8 832 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 SPOPLQ6IQ16 392 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 DHX37Q8IY37 1157 aaKnown RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 IFT81Q8WYA0 676 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 COPS5Q92905 334 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 NAP1L3Q99457 506 aaPredicted RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 SH3GL2Q99962 352 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
USP8-208ENST00000559329 NR2E1Q9Y466 385 aa17.09■□□□□ 0.33
USP8-208ENST00000559329 CLDN3O15551 220 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 CYP1A1P04798 512 aaPredicted RBP17.08■□□□□ 0.33
USP8-208ENST00000559329 CLTAP09496 248 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 MARCKSL1P49006 195 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 BPIFB4P59827 614 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 PTENP60484 403 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 MCL1Q07820 350 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 MESDQ14696 234 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 ALS2CLQ60I27 953 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 LRRC71Q8N4P6 559 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 UBL4BQ8N7F7 174 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 WHAMMQ8TF30 809 aa17.08■□□□□ 0.33
USP8-208ENST00000559329 GTF3C2Q8WUA4 911 aaPredicted RBP17.08■□□□□ 0.33
USP8-208ENST00000559329 RIN2Q8WYP3 895 aaPredicted RBP17.08■□□□□ 0.33
USP8-208ENST00000559329 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 ASB14A6NK59 587 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.32
USP8-208ENST00000559329 CYP2C8P10632 490 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 PROZP22891 400 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 CTNNA2P26232 953 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 CTNNA1P35221 906 aaKnown RBP17.08■□□□□ 0.32
USP8-208ENST00000559329 TNFSF9P41273 254 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 ZNF211Q13398 564 aaPredicted RBP17.08■□□□□ 0.32
USP8-208ENST00000559329 SEZ6Q53EL9 994 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 WDR49Q8IV35 697 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 UBR7Q8N806 425 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 RNF149Q8NC42 400 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
USP8-208ENST00000559329 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 EFCC1Q9HA90 598 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 AVENQ9NQS1 362 aaPredicted RBP17.08■□□□□ 0.32
USP8-208ENST00000559329 PDGFCQ9NRA1 345 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 AMACRQ9UHK6 382 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 PNMA3Q9UL41 463 aa17.08■□□□□ 0.32
USP8-208ENST00000559329 UNCXA6NJT0 531 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 PHACTR2O75167 634 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 PRKCBP05771 671 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 AP3M2P53677 418 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 NOP14P78316 857 aaKnown RBP17.07■□□□□ 0.32
USP8-208ENST00000559329 CENPCQ03188 943 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 PPP2R5EQ16537 467 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 MAATS1Q7Z4T9 603 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 MCOLN2Q8IZK6 566 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 PTPRHQ9HD43 1115 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 CNOT8Q9UFF9 292 aaKnown RBP17.07■□□□□ 0.32
USP8-208ENST00000559329 NUB1Q9Y5A7 615 aa17.07■□□□□ 0.32
USP8-208ENST00000559329 OGTO15294 1046 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 HBP1O60381 514 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
USP8-208ENST00000559329 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
USP8-208ENST00000559329 ARHGAP1Q07960 439 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 NCOA4Q13772 614 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 MAPK6Q16659 721 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 ZNF792Q3KQV3 632 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 SCARA3Q6AZY7 606 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 TSHZ1Q6ZSZ6 1077 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 CPNE8Q86YQ8 564 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 IQCKQ8N0W5 287 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 FZD8Q9H461 694 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 CPSF3Q9UKF6 684 aaKnown RBP17.06■□□□□ 0.32
USP8-208ENST00000559329 PCDHA3Q9Y5H8 950 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 UMODL1Q5DID0 1318 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 PLXNA1Q9UIW2 1896 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 TMEM110-MUSTN1A8MSY1 372 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 TTI1O43156 1089 aa17.06■□□□□ 0.32
USP8-208ENST00000559329 MYBL1P10243 752 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms