RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 MAN1C1Q9NR34 630 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 DNAI1Q9UI46 699 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 DUSP12Q9UNI6 340 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 PRG3Q9Y2Y8 225 aaPredicted RBP6.45□□□□□ -1.38
USP3-212ENST00000559276 ZNF292O60281 2723 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
USP3-212ENST00000559276 A0A1B0GUA9 196 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 KRBA1A5PL33 1030 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 EFCAB8A8MWE9 144 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 BTBD18B2RXH4 712 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 ASAP2O43150 1006 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 TUBBP07437 444 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 SPATA31D3P0C874 917 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 SPATA31C1P0DKV0 1188 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 ITGA4P13612 1032 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 RPL17P18621 184 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 AOC1P19801 751 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 AKAP5P24588 427 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 AXLP30530 894 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 GLUD2P49448 558 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 RARRES1P49788 294 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 ETF1P62495 437 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 TDGQ13569 410 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 NAB2Q15742 525 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 FBXO38Q6PIJ6 1188 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 SPATA31D4Q6ZUB0 917 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 CCDC149Q6ZUS6 474 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 TPH2Q8IWU9 490 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 TXLNBQ8N3L3 684 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 CNNM3Q8NE01 707 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 URGCPQ8TCY9 931 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 TCP11Q8WWU5 503 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 RABGGTAQ92696 567 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 SNX27Q96L92 541 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 MTRQ99707 1265 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 EMILIN2Q9BXX0 1053 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 NFKBIZQ9BYH8 718 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 TMEM60Q9H2L4 133 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 WDR6Q9NNW5 1121 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 MRPL17Q9NRX2 175 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 KIAA1468Q9P260 1216 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 TFIP11Q9UBB9 837 aaKnown RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 EPS15L1Q9UBC2 864 aa6.44□□□□□ -1.38
USP3-212ENST00000559276 ORC3Q9UBD5 711 aaPredicted RBP6.44□□□□□ -1.38
USP3-212ENST00000559276 FAM237AA0A1B0GTK4 181 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CCDC195A0A1B0GUA6 201 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 INO80B-WBP1J3KQ70 363 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 PTGESO14684 152 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ADAM12O43184 909 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 TGM5O43548 720 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 JAK2O60674 1132 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 DKC1O60832 514 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP3-212ENST00000559276 MED24O75448 989 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 DGAT1O75907 488 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ERLIN2O94905 339 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 URODP06132 367 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 OR1G1P47890 313 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ME1P48163 572 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 NLRP12P59046 1061 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 MXD4Q14582 209 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 PCBP1Q15365 356 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP3-212ENST00000559276 ELF2Q15723 593 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CT47A1Q5JQC4 288 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 RTP2Q5QGT7 225 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CDCA2Q69YH5 1023 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 FUT10Q6P4F1 479 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 NOTUMQ6P988 496 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CPLX2Q6PUV4 134 aaKnown RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 POTEHQ6S545 545 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 PRSS55Q6UWB4 352 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 TMCO3Q6UWJ1 677 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CD300LGQ6UXG3 332 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 C11orf57Q6ZUT1 292 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 OTUD6AQ7L8S5 288 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 FRMD5Q7Z6J6 570 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 PALB2Q86YC2 1186 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 EXOC8Q8IYI6 725 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 CCDC105Q8IYK2 499 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 SIX5Q8N196 739 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 SLC44A3Q8N4M1 653 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 FSIP1Q8NA03 581 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ST13P5Q8NFI4 369 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 PIGOQ8TEQ8 1089 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 UBXN4Q92575 508 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ZNF592Q92610 1267 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 ACSF2Q96CM8 615 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 CCDC51Q96ER9 411 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 PPP1R13BQ96KQ4 1090 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 FAM193BQ96PV7 902 aaPredicted RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 RPP25Q9BUL9 199 aaKnown RBP6.43□□□□□ -1.38
USP3-212ENST00000559276 APOL6Q9BWW8 343 aa6.43□□□□□ -1.38
USP3-212ENST00000559276 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms