RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ARHGEF2Q92974 986 aaKnown RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 SERPINB12Q96P63 405 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 DCLK3Q9C098 648 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 NSRP1Q9H0G5 558 aaKnown RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 DNAJC17Q9NVM6 304 aaKnown RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 CTNNAL1Q9UBT7 734 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 OAS1P00973 400 aaKnown RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 ASNSP08243 561 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 ITGA8P53708 1063 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 DGKZQ13574 1117 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 PHLDB2Q86SQ0 1253 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 MGARPQ8TDB4 240 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 POMGNT1Q8WZA1 660 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 AVENQ9NQS1 362 aaPredicted RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 HOMER3Q9NSC5 361 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 ADGRA3Q8IWK6 1321 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 TMEM120BA0PK00 339 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 MGRN1O60291 552 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 SCP2P22307 547 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 RRM1P23921 792 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 GCNT1Q02742 428 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 TRPM8Q7Z2W7 1104 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 ABCF3Q9NUQ8 709 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 PGAP2Q9UHJ9 254 aa17.7■□□□□ 0.42
SPG11-215ENST00000559193 R3HDM2Q9Y2K5 976 aaKnown RBP17.7■□□□□ 0.42
SPG11-215ENST00000559193 FOXO6A8MYZ6 492 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 C21orf2O43822 256 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 SNX3O60493 162 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 TTC4O95801 387 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 PREPLQ4J6C6 727 aaPredicted RBP17.69■□□□□ 0.42
SPG11-215ENST00000559193 DAB2IPQ5VWQ8 1189 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 SYDE1Q6ZW31 735 aaPredicted RBP17.69■□□□□ 0.42
SPG11-215ENST00000559193 SPIRE2Q8WWL2 714 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 CPA5Q8WXQ8 436 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
SPG11-215ENST00000559193 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 PLSCR1O15162 318 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
SPG11-215ENST00000559193 SFNP31947 248 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 ELF3P78545 371 aaPredicted RBP17.69■□□□□ 0.42
SPG11-215ENST00000559193 KRT76Q01546 638 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 C2CD6Q53TS8 623 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 PWWP2AQ96N64 755 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 PDCD2LQ9BRP1 358 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
SPG11-215ENST00000559193 O00370 1275 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 MAN1A1P33908 653 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
SPG11-215ENST00000559193 KYNUQ16719 465 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 FKBP1CQ5VVH2 108 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 CCDC50Q8IVM0 306 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 GPD1LQ8N335 351 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 OGFOD1Q8N543 542 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 MAIP1Q8WWC4 291 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 NTPCRQ9BSD7 190 aaKnown RBP17.68■□□□□ 0.42
SPG11-215ENST00000559193 COL4A5P29400 1685 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 ATF2P15336 505 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 DYDC1Q8WWB3 177 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 RMDN3Q96TC7 470 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 PXMP2Q9NR77 195 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 FGFR1OP2Q9NVK5 253 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 NINJ2Q9NZG7 142 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 NEU2Q9Y3R4 380 aa17.68■□□□□ 0.42
SPG11-215ENST00000559193 UMODL1Q5DID0 1318 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 TCP11X1B4DZS4 312 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 SORBS3O60504 671 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 GAS8O95995 478 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 SLC1A1P43005 524 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 VPS41P49754 854 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 FAM133BQ5BKY9 247 aaKnown RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 WLSQ5T9L3 541 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 HIBCHQ6NVY1 386 aaPredicted RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 C15orf39Q6ZRI6 1047 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 USP37Q86T82 979 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 SAMD3Q8N6K7 520 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 MAGEC3Q8TD91 643 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 GRK7Q8WTQ7 553 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 ZNF516Q92618 1163 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 FAM213AQ9BRX8 229 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 C1orf112Q9NSG2 853 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 HNRNPDLO14979 420 aaKnown RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 ZNF862O60290 1169 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
SPG11-215ENST00000559193 APBA3O96018 575 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 MYBL1P10243 752 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 MAP3K10Q02779 954 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 MPP2Q14168 576 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 LMBRD2Q68DH5 695 aaPredicted RBP17.67■□□□□ 0.42
SPG11-215ENST00000559193 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms