RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 MYO6Q9UM54 1294 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 TRAF3IP3Q9Y228 551 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 SIK3Q9Y2K2 1263 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 REXO2Q9Y3B8 237 aaKnown RBP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.32□□□□□ -1.08
LRRC28-211ENST00000558890 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 COL4A6Q14031 1691 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 TTC3P53804 2025 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 COL6A3P12111 3177 aa8.32□□□□□ -1.08
LRRC28-211ENST00000558890 A0A0U1RQJ8 604 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 SSU72P8A0A1W2PR75 194 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 GRXCR1A8MXD5 290 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 K7ENM7 598 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 K7ERI5 159 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ACKR2O00590 384 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 PDXKO00764 312 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ENPP3O14638 875 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MAPK13O15264 365 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MAP3K13O43283 966 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 EFCAB14O75071 495 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TACC1O75410 805 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 VTNP04004 478 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 CTSHP09668 335 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MCM3P25205 808 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 KIF11P52732 1056 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 NLRP11P59045 1033 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 FAM189BP81408 668 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MBTD1Q05BQ5 628 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TMEM62Q0P6H9 643 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 STRN3Q13033 797 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 DSC3Q14574 896 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TDRD12Q587J7 1177 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 SLFN12LQ6IEE8 588 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 CCDC70Q6NSX1 233 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 CNKSR3Q6P9H4 555 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 WDR59Q6PJI9 974 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 RRAGAQ7L523 313 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 RHPN2Q8IUC4 686 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 SLC9A9Q8IVB4 645 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 RNF149Q8NC42 400 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ATRIPQ8WXE1 791 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 BSNDQ8WZ55 320 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TMEM143Q96AN5 459 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 EEF2KMTQ96G04 330 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 LRCH3Q96II8 777 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ACCSQ96QU6 501 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TSPAN18Q96SJ8 248 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 LSM14BQ9BX40 385 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 IFIH1Q9BYX4 1025 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 KIAA1586Q9HCI6 787 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ERVK-5Q9HDB9 667 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 GPRC5CQ9NQ84 441 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 PADI3Q9ULW8 664 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 TBX20Q9UMR3 447 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 PLAGL2Q9UPG8 496 aa8.31□□□□□ -1.08
LRRC28-211ENST00000558890 NOC2LQ9Y3T9 749 aaKnown RBP8.31□□□□□ -1.08
LRRC28-211ENST00000558890 ADGRA3Q8IWK6 1321 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 MYO7AQ13402 2215 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 A0A0C4DFX4 3053 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 A0A087WZ62 844 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ABHD14A-ACY1A0A1B0GW23 586 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 DENND3A2RUS2 1198 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 CCDC151A5D8V7 595 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 LRRIQ4A6NIV6 560 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 LRRC53A6NM62 1247 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SLC16A3O15427 465 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 MGEA5O60502 916 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 TOM1L1O75674 476 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 BAIAP3O94812 1187 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GCNT3O95395 438 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GHRP10912 638 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 EPB41P11171 864 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SKIP12755 728 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GARTP22102 1010 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 PROZP22891 400 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 CD52P31358 61 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 RAB27AP51159 221 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 WDR5P61964 334 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 DEFB103AP81534 67 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SMAD3P84022 425 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 AMPD2Q01433 879 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GPS2Q13227 327 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ADAM9Q13443 819 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 AMHR2Q16671 573 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 KNOP1Q1ED39 458 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 KIZQ2M2Z5 673 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SFMBT2Q5VUG0 894 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GPR153Q6NV75 609 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 CC2D1AQ6P1N0 951 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 HS2ST1Q7LGA3 356 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms