RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
AP3S2-206ENST00000558806 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
AP3S2-206ENST00000558806 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 FOXQ1Q9C009 403 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
AP3S2-206ENST00000558806 LIMCH1Q9UPQ0 1083 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 TNFSF13BQ9Y275 285 aa11.76□□□□□ -0.53
AP3S2-206ENST00000558806 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 CCDC169A6NNP5 214 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 SP9P0CG40 484 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 GRM5P41594 1212 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 MAGEA9P43362 315 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 ECM1Q16610 540 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 ZNF568Q3ZCX4 644 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 SLC44A4Q53GD3 710 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 ZNF461Q8TAF7 563 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 SNX29Q8TEQ0 813 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 BORCS6Q96GS4 357 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 ACO2Q99798 780 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 DDX23Q9BUQ8 820 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 OSBPL6Q9BZF3 934 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 GOLGA2P5Q9HBQ8 144 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 HCFC1R1Q9NWW0 138 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 GDE1Q9NZC3 331 aa11.75□□□□□ -0.53
AP3S2-206ENST00000558806 DNMT3BQ9UBC3 853 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
AP3S2-206ENST00000558806 VWA8A3KMH1 1905 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 ECI2O75521 394 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 RHOP08100 348 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 GLULP15104 373 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 ELF1P32519 619 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 BRCC3P46736 316 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 NPTX2P47972 431 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 PEX3P56589 373 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 DMP1Q13316 513 aaPredicted RBP11.74□□□□□ -0.53
AP3S2-206ENST00000558806 ZNF528Q3MIS6 628 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 SLC8B1Q6J4K2 584 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 CD300LGQ6UXG3 332 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 ALKAL1Q6UXT8 129 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 CEP120Q8N960 986 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 DRC1Q96MC2 740 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 MRPL4Q9BYD3 311 aaKnown RBP11.74□□□□□ -0.53
AP3S2-206ENST00000558806 CDT1Q9H211 546 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 C17orf75Q9HAS0 396 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 PTPRHQ9HD43 1115 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 AVENQ9NQS1 362 aaPredicted RBP11.74□□□□□ -0.53
AP3S2-206ENST00000558806 FBXO4Q9UKT5 387 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 DNM3Q9UQ16 869 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
AP3S2-206ENST00000558806 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
AP3S2-206ENST00000558806 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
AP3S2-206ENST00000558806 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 H7C4K7 107 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 I3L4J1 428 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 LAD1O00515 517 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 PODXLO00592 558 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 PRRG1O14668 218 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 SYN3O14994 580 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 NCAM2O15394 837 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 LAMTOR5O43504 91 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 HIP1RO75146 1068 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ABLIM3O94929 683 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 LRG1P02750 347 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 MCF2P10911 925 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 PTPN2P17706 415 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 IGFBP6P24592 240 aaPredicted RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 RPL9P32969 192 aaKnown RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 OSTNP61366 133 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ROR1Q01973 937 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 UBXN2BQ14CS0 331 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 VARS2Q5ST30 1063 aaKnown RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 KRT79Q5XKE5 535 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 RUBCNQ92622 972 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
AP3S2-206ENST00000558806 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 NELL2Q99435 816 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
AP3S2-206ENST00000558806 KMT5AQ9NQR1 393 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms