RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 TUBGCP4Q9UGJ1 667 aa12.8□□□□□ -0.36
CCDC33-204ENST00000558645 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
CCDC33-204ENST00000558645 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
CCDC33-204ENST00000558645 MYH10P35580 1976 aa12.8□□□□□ -0.36
CCDC33-204ENST00000558645 SMIM28A0A1B0GU29 152 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 LCHNA4D1U4 455 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 LRRIQ3A6PVS8 624 aaPredicted RBP12.79□□□□□ -0.36
CCDC33-204ENST00000558645 BECN2A8MW95 431 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
CCDC33-204ENST00000558645 GJB5O95377 273 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 BFSP1Q12934 665 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 PSMD6Q15008 389 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 KYAT1Q16773 422 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
CCDC33-204ENST00000558645 NOMO2Q5JPE7 1267 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 CDKAL1Q5VV42 579 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 ZNF280BQ86YH2 543 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 ABI1Q8IZP0 508 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 ZBED2Q9BTP6 218 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
CCDC33-204ENST00000558645 THAP9Q9H5L6 903 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 KIAA1586Q9HCI6 787 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 TBC1D13Q9NVG8 400 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
CCDC33-204ENST00000558645 CASTOR2A6NHX0 329 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 IKBKBO14920 756 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 DDHD2O94830 711 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 IL18RAPO95256 599 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 KRT13P13646 458 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 TNNI1P19237 187 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PBX2P40425 430 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PBX3P40426 434 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 VAMP7P51809 220 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 SMAD3P84022 425 aaKnown RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 TFAMQ00059 246 aaKnown RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 NAB2Q15742 525 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 ZNF689Q96CS4 500 aaPredicted RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PAAF1Q9BRP4 392 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
CCDC33-204ENST00000558645 EYSQ5T1H1 3165 aa12.78□□□□□ -0.36
CCDC33-204ENST00000558645 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 F8W810 466 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 PPEF2O14830 753 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 MAPK13O15264 365 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 INPPL1O15357 1258 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 HOXA2O43364 376 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 TLL1O43897 1013 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 FGFR1OPO95684 399 aaKnown RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 THP07101 528 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 KCNE1P15382 129 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 GCLMP48507 274 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 GRIK3Q13003 919 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 FAM43BQ6ZT52 329 aaPredicted RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 Q7L0L9 218 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 SPRED2Q7Z698 418 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 NRDE2Q9H7Z3 1164 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
CCDC33-204ENST00000558645 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 YBX2Q9Y2T7 364 aaKnown RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
CCDC33-204ENST00000558645 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms