RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 K7ENM7 598 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 STX6O43752 255 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 TRAK2O60296 914 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 RFPL2O75678 378 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 C1RP00736 705 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 SCP2P22307 547 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 NCKAP1LP55160 1127 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 MCL1Q07820 350 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 UPP1Q16831 310 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 SMG7Q92540 1137 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 FAM122AQ96E09 287 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 CLIC6Q96NY7 704 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 CLSTN3Q9BQT9 956 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 FBXO2Q9UK22 296 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
CDC42BPB-202ENST00000558321 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 TMEM189-UBE2V1I3L0A0 370 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 I3L4J1 428 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 PODXLO00592 558 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 ABLIM1O14639 778 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 CLTAP09496 248 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 KCNE1P15382 129 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 FGFR3P22607 806 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 SIGLEC14Q08ET2 396 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 CNTN3Q9P232 1028 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
CDC42BPB-202ENST00000558321 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ASGR2P07307 311 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ABCD1P33897 745 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 OR1D2P34982 312 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 BRCC3P46736 316 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZNF131P52739 623 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 MTMR3Q13615 1198 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SLC39A14Q15043 492 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 STK38Q15208 465 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 KYAT1Q16773 422 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SLC10A6Q3KNW5 377 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 STAMQ92783 540 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 SNX21Q969T3 373 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZNF396Q96N95 335 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 PRKD2Q9BZL6 878 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 STK17AQ9UEE5 414 aa13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-202ENST00000558321 CLUHO75153 1309 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 ADAM12O43184 909 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 ZMYND10O75800 440 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 CXCL8P10145 99 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 TKTP29401 623 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 STAT6P42226 847 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 SPAG1Q07617 926 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 CD300LGQ6UXG3 332 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 DDX12PQ92771 950 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 POLIQ9UNA4 740 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
CDC42BPB-202ENST00000558321 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-202ENST00000558321 OGTO15294 1046 aa13.48□□□□□ -0.25
CDC42BPB-202ENST00000558321 C8AP07357 584 aa13.48□□□□□ -0.25
CDC42BPB-202ENST00000558321 HNRNPA1P09651 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDC42BPB-202ENST00000558321 MCM4P33991 863 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms