RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SLC38A7Q9NVC3 462 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 SLC16A3O15427 465 aaKnown RBP23.05■■□□□ 1.28
CASC4-204ENST00000557945 KRT13P13646 458 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 DNAJB2P25686 324 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 TFAMQ00059 246 aaKnown RBP23.05■■□□□ 1.28
CASC4-204ENST00000557945 FILIP1Q7Z7B0 1213 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 TIFAQ96CG3 184 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 TSPAN18Q96SJ8 248 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 MKNK1Q9BUB5 465 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 DERAQ9Y315 318 aa23.05■■□□□ 1.28
CASC4-204ENST00000557945 CASTOR2A6NHX0 329 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 MAPK13O15264 365 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 XPOTO43592 962 aaKnown RBP23.04■■□□□ 1.28
CASC4-204ENST00000557945 B4GALT3O60512 393 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 TUSC3Q13454 348 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 CCDC40Q4G0X9 1142 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 SPATA1Q5VX52 437 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 PPP2R2DQ66LE6 453 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 LMBRD2Q68DH5 695 aaPredicted RBP23.04■■□□□ 1.28
CASC4-204ENST00000557945 INTS8Q75QN2 995 aaKnown RBP23.04■■□□□ 1.28
CASC4-204ENST00000557945 EFCAB13Q8IY85 973 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 SLC28A3Q9HAS3 691 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 DNAJB4Q9UDY4 337 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 UBQLN1Q9UMX0 589 aaKnown RBP23.04■■□□□ 1.28
CASC4-204ENST00000557945 C2CD2Q9Y426 696 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 TRIP11Q15643 1979 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 GBF1Q92538 1859 aa23.04■■□□□ 1.28
CASC4-204ENST00000557945 LAG3P18627 525 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 TNNI1P19237 187 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 OR1G1P47890 313 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 VAMP7P51809 220 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 DSC1Q08554 894 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 USP37Q86T82 979 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 CREBRFQ8IUR6 639 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 COLGALT2Q8IYK4 626 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 BEST2Q8NFU1 509 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 ENOX1Q8TC92 643 aaKnown RBP23.03■■□□□ 1.28
CASC4-204ENST00000557945 PLEKHO2Q8TD55 490 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 CACTINQ8WUQ7 758 aaKnown RBP23.03■■□□□ 1.28
CASC4-204ENST00000557945 POP1Q99575 1024 aaKnown RBP23.03■■□□□ 1.28
CASC4-204ENST00000557945 GOLGA2P5Q9HBQ8 144 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 AAASQ9NRG9 546 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 CACNG4Q9UBN1 327 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 TUBGCP4Q9UGJ1 667 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 RALGAPA2Q2PPJ7 1873 aa23.03■■□□□ 1.28
CASC4-204ENST00000557945 GNA14O95837 355 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 ALDH2P05091 517 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 PBX3P40426 434 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 ALDH7A1P49419 539 aaKnown RBP23.02■■□□□ 1.28
CASC4-204ENST00000557945 GUCY2FP51841 1108 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 BCAR1P56945 870 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 TAP1Q03518 808 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 SOX4Q06945 474 aaPredicted RBP23.02■■□□□ 1.28
CASC4-204ENST00000557945 BFSP1Q12934 665 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 NAB2Q15742 525 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 ZBTB6Q15916 424 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 NT5DC4Q86YG4 428 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 TMC2Q8TDI7 906 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 PARD3BQ8TEW8 1205 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 RABGGTAQ92696 567 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 FAM84AQ96KN4 292 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 ZNF558Q96NG5 402 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 CGRRF1Q99675 332 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 ARMCX3Q9UH62 379 aaPredicted RBP23.02■■□□□ 1.28
CASC4-204ENST00000557945 MTUS1Q9ULD2 1270 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 FAN1Q9Y2M0 1017 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 NFE2L3Q9Y4A8 694 aa23.02■■□□□ 1.28
CASC4-204ENST00000557945 TDRD15B5MCY1 1934 aaKnown RBP23.02■■□□□ 1.28
CASC4-204ENST00000557945 TNNC2P02585 160 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 TMEM191BP0C7N4 346 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 CTNNB1P35222 781 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 SLC11A1P49279 550 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 ZNF165P49910 485 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 MYL5Q02045 173 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 DUOXA2Q1HG44 320 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 KCNT2Q6UVM3 1135 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 FRMD5Q7Z6J6 570 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 WDR49Q8IV35 697 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 AOPEPQ8N6M6 819 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 COLGALT1Q8NBJ5 622 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 CLP1Q92989 425 aaKnown RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 ANKRD36BP1Q96IX9 119 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 TGS1Q96RS0 853 aaKnown RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 TMEM175Q9BSA9 504 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 C17orf80Q9BSJ5 609 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 METTL14Q9HCE5 456 aaKnown RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 INTS13Q9NVM9 706 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 PRG3Q9Y2Y8 225 aaPredicted RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 PCDHB12Q9Y5F1 795 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 PTPRJQ12913 1337 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 LRRIQ3A6PVS8 624 aaPredicted RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 NT5C1B-RDH14C9J2C7 533 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 GALTP07902 379 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 CYP3A5P20815 502 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 DLG4P78352 724 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 HSP90AA4PQ58FG1 418 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 DCAF17Q5H9S7 520 aaPredicted RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 TCERG1LQ5VWI1 586 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 SPRED2Q7Z698 418 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms