RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PLCL1Q15111 1095 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 RAB30Q15771 203 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FLYWCH1Q4VC44 716 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 C1QTNF12Q5T7M4 302 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 CD276Q5ZPR3 534 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ARL6IP4Q66PJ3 421 aaKnown RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 BICRALQ6AI39 1079 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 BORAQ6PGQ7 559 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 KLHL17Q6TDP4 642 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 GATAD2AQ86YP4 633 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FBXL6Q8N531 539 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 TSPYL6Q8N831 410 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ANKS4BQ8N8V4 417 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ARRDC4Q8NCT1 418 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 IPO4Q8TEX9 1081 aaKnown RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 LINC01599Q8WXQ3 324 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 HERVK_113Q902F9 699 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 HTRA1Q92743 480 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 TRIM43Q96BQ3 446 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 EID2BQ96D98 161 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 CYFIP2Q96F07 1278 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SCARF2Q96GP6 870 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 UHRF1Q96T88 793 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 SDF4Q9BRK5 362 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 G6PC3Q9BUM1 346 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 AMNQ9BXJ7 453 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 MAGEB5Q9BZ81 275 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 LMAN2LQ9H0V9 348 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ALDH8A1Q9H2A2 487 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 TMEM8AQ9HCN3 771 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SEPSECSQ9HD40 501 aaKnown RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.36□□□□□ -1.71
TDP1-217ENST00000557782 GALNT8Q9NY28 637 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 AASSQ9UDR5 926 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SRRDQ9UH36 339 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FBXO10Q9UK96 956 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ACSL6Q9UKU0 697 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 PLOD3O60568 738 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 TMEM127O75204 238 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ENO2P09104 434 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 LTA4HP09960 611 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 MSL3P1P0C860 447 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 GLI4P10075 376 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MYCLP12524 364 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 PRKCAP17252 672 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 FUT4P22083 530 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 CTSSP25774 331 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 PRDX5P30044 214 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ADSLP30566 484 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 HOXD12P35452 270 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ADD2P35612 726 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 CARSP49589 748 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 TUBP50607 506 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ARFIP2P53365 341 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MAP3K12Q12852 859 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 RAB32Q13637 225 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ADGRE1Q14246 886 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MBTPS1Q14703 1052 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MAN2A1Q16706 1144 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 DGKDQ16760 1214 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ARMC3Q5W041 872 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 SULT6B1Q6IMI4 303 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 TMCO3Q6UWJ1 677 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 GALNT5Q7Z7M9 940 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 PPP1R3BQ86XI6 285 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 CCDC117Q8IWD4 279 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 TCP11L2Q8N4U5 519 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 CELF5Q8N6W0 485 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 LSMEM1Q8N8F7 131 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 CCHCR1Q8TD31 782 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 NETO1Q8TDF5 533 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ADAMTS18Q8TE60 1221 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ASB11Q8WXH4 323 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 HOXB13Q92826 284 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 LRRC46Q96FV0 321 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 PEX11GQ96HA9 241 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MFSD14AQ96MC6 490 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 P2RX7Q99572 595 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 FDXACB1Q9BRP7 624 aaPredicted RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 CENPOQ9BU64 300 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 KATNAL1Q9BW62 490 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ZNF518BQ9C0D4 1074 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 OR10A5Q9H207 317 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ADAM7Q9H2U9 754 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MRPL46Q9H2W6 279 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 SH3GLB2Q9NR46 395 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ANKEF1Q9NU02 776 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 DTLQ9NZJ0 730 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 SRP68Q9UHB9 627 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 HERC5Q9UII4 1024 aaKnown RBP4.35□□□□□ -1.71
TDP1-217ENST00000557782 PLAGL2Q9UPG8 496 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 MED16Q9Y2X0 877 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 SIT1Q9Y3P8 196 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 U3KQE9 123 aa4.35□□□□□ -1.71
TDP1-217ENST00000557782 A0A0B4J269 797 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms