RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 AGPAT3Q9NRZ7 376 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 DMAC2Q9NW81 257 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 SNTG2Q9NY99 539 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 ANKFY1Q9P2R3 1169 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 CPSF3Q9UKF6 684 aaKnown RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 INSL6Q9Y581 213 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 MRPL42Q9Y6G3 142 aaKnown RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ARL5CA6NH57 179 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 EPOPA6NHQ4 379 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 OGTO15294 1046 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 CLDN3O15551 220 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 STAG3L1P0CL83 205 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ITGA4P13612 1032 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 GARTP22102 1010 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 MLH1P40692 756 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 PRCPP42785 496 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 DSC1Q08554 894 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 NCBP1Q09161 790 aaKnown RBP9.84□□□□□ -0.83
CHD8-214ENST00000557727 RAB30Q15771 203 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
CHD8-214ENST00000557727 KNOP1Q1ED39 458 aaKnown RBP9.84□□□□□ -0.83
CHD8-214ENST00000557727 CTC1Q2NKJ3 1217 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ZNF658Q5TYW1 1059 aaPredicted RBP9.84□□□□□ -0.83
CHD8-214ENST00000557727 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 C12orf56Q8IXR9 622 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ADSSL1Q8N142 457 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 RNF169Q8NCN4 708 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 SMARCE1Q969G3 411 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 SNX27Q96L92 541 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ZMAT2Q96NC0 199 aaKnown RBP9.84□□□□□ -0.83
CHD8-214ENST00000557727 YME1L1Q96TA2 773 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 GAD1Q99259 594 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 ADPGKQ9BRR6 497 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 GBP3Q9H0R5 595 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 NUP62CLQ9H1M0 184 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 TMEM206Q9H813 350 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 TBC1D13Q9NVG8 400 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 TMEM63CQ9P1W3 806 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 GIT1Q9Y2X7 761 aa9.84□□□□□ -0.83
CHD8-214ENST00000557727 TBKBP1A7MCY6 615 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 GOLGA6L22H0YM25 854 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 DDHD2O94830 711 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 SMC2O95347 1197 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 EFEMP2O95967 443 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 CXCL8P10145 99 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 IBSPP21815 317 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 IGFBP6P24592 240 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 ACOT2P49753 483 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 SCNN1GP51170 649 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 MCCD1P59942 119 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 OSTNP61366 133 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 SOX4Q06945 474 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 PAN2Q504Q3 1202 aaKnown RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 NOMO2Q5JPE7 1267 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 ISM2Q6H9L7 571 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 CENPPQ6IPU0 288 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 ZNF280BQ86YH2 543 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 SLC9A9Q8IVB4 645 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 ZC3H3Q8IXZ2 948 aaKnown RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 THNSL1Q8IYQ7 743 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 TIFAQ96CG3 184 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 PGBD4Q96DM1 585 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 BICD1Q96G01 975 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 PPP1R10Q96QC0 940 aaKnown RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 C17orf80Q9BSJ5 609 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 MSTO1Q9BUK6 570 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 APOL6Q9BWW8 343 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 TRIM6Q9C030 488 aaPredicted RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 TYW1Q9NV66 732 aaKnown RBP9.83□□□□□ -0.84
CHD8-214ENST00000557727 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 LRFN2Q9ULH4 789 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 EXOC7Q9UPT5 735 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
CHD8-214ENST00000557727 BIN1O00499 593 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 PDXKO00764 312 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CLIC2O15247 247 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 HOXA2O43364 376 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 LPXNO60711 386 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 MBD3O95983 291 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CLTAP09496 248 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 HARSP12081 509 aaKnown RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 KCNE1P15382 129 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CD46P15529 392 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 MMP16P51512 607 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 ERVK-21P61565 698 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 SNRPFP62306 86 aaKnown RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 POU5F1Q01860 360 aaKnown RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 BTG3Q14201 252 aaPredicted RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 ZBTB6Q15916 424 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 NFIL3Q16649 462 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms