RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ATXN2LQ8WWM7 1075 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 STAMQ92783 540 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 IGSF21Q96ID5 467 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ZFP42Q96MM3 310 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 UROC1Q96N76 676 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 CDCA3Q99618 268 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TCF25Q9BQ70 676 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 MSTO1Q9BUK6 570 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 EMILIN2Q9BXX0 1053 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 ST6GALNAC4Q9H4F1 302 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TLE6Q9H808 572 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 RPF1Q9H9Y2 349 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 KBTBD4Q9NVX7 518 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 CHMP5Q9NZZ3 219 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 TBC1D7Q9P0N9 293 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 HOOK1Q9UJC3 728 aaKnown RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-223ENST00000557511 LAMA3Q16787 3333 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 PTPRSQ13332 1948 aa9.09□□□□□ -0.95
PSEN1-223ENST00000557511 A0A087X0B3 334 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 OGTO15294 1046 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 DDHD2O94830 711 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 KIF20AO95235 890 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 CXCL14O95715 111 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 MYL1P05976 194 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 URODP06132 367 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 CLTAP09496 248 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 LINC00271P0C7V0 271 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 NDUFV1P49821 464 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 PPP2R3AQ06190 1150 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 MCL1Q07820 350 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 COASYQ13057 564 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 TAS1R3Q7RTX0 852 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 RBM23Q86U06 439 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 ZNF280BQ86YH2 543 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 CD302Q8IX05 232 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 COLGALT2Q8IYK4 626 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 VPS52Q8N1B4 723 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 POMGNT1Q8WZA1 660 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 KCNN1Q92952 543 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 DNAJC19Q96DA6 116 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 PABPC5Q96DU9 382 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 C7orf25Q9BPX7 421 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 PLEKHA5Q9HAU0 1116 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 PTPRHQ9HD43 1115 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 MRPL17Q9NRX2 175 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 EXOC1Q9NV70 894 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 CLDND1Q9NY35 253 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 DNAJB4Q9UDY4 337 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
PSEN1-223ENST00000557511 R3HCC1Q9Y3T6 440 aaKnown RBP9.08□□□□□ -0.96
PSEN1-223ENST00000557511 SF3B1O75533 1304 aaKnown RBP eCLIP9.07□□□□□ -0.963e-6■■■■■ 80.4
PSEN1-223ENST00000557511 RALGAPA2Q2PPJ7 1873 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 CASTOR2A6NHX0 329 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 PIGRP01833 764 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 PROZP22891 400 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 NRIP1P48552 1158 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 CREMQ03060 361 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 ZC2HC1CQ53FD0 456 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 FAM26FQ5R3K3 315 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 PDXDC1Q6P996 788 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 HS2ST1Q7LGA3 356 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 PPFIBP1Q86W92 1011 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 ZBTB45Q96K62 511 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 TSPAN18Q96SJ8 248 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 BLZF1Q9H2G9 400 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 UBE2ZQ9H832 354 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 GDPD2Q9HCC8 539 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 MIOSQ9NXC5 875 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 DPP7Q9UHL4 492 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 ADAM28Q9UKQ2 775 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
PSEN1-223ENST00000557511 NUB1Q9Y5A7 615 aa9.07□□□□□ -0.96
PSEN1-223ENST00000557511 SMIM28A0A1B0GU29 152 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
PSEN1-223ENST00000557511 EIF3DO15371 548 aaKnown RBP eCLIP9.06□□□□□ -0.96
PSEN1-223ENST00000557511 B3GAT3O94766 335 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 S1PR4O95977 384 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 SOD2P04179 222 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 EDN1P05305 212 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 MYBP10242 640 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 CTSAP10619 480 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 KCNA5P22460 613 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 DNAJB1P25685 340 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 KLRC2P26717 231 aa9.06□□□□□ -0.96
PSEN1-223ENST00000557511 IRS1P35568 1242 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms