RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 LSM14AQ8ND56 463 aaKnown RBP10.55□□□□□ -0.72
NEDD1-211ENST00000557454 ZSCAN18Q8TBC5 510 aaPredicted RBP10.55□□□□□ -0.72
NEDD1-211ENST00000557454 EVI5LQ96CN4 794 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
NEDD1-211ENST00000557454 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 SNTG2Q9NY99 539 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 GTSE1Q9NYZ3 720 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 TCEAL9Q9UHQ7 104 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 MBD1Q9UIS9 605 aaPredicted RBP10.55□□□□□ -0.72
NEDD1-211ENST00000557454 HES2Q9Y543 173 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 IPPQ9Y573 584 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 ABCA7Q8IZY2 2146 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 LRG1P02750 347 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 FTH1P19P0C7X4 201 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 BCKDHBP21953 392 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 HOXA11P31270 313 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-211ENST00000557454 DHPSP49366 369 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-211ENST00000557454 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 CFHR1Q03591 330 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-211ENST00000557454 ZNF746Q6NUN9 644 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
NEDD1-211ENST00000557454 SCUBE3Q8IX30 993 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 HDDC3Q8N4P3 179 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 NUP205Q92621 2012 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 ZFYVE19Q96K21 471 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PAAF1Q9BRP4 392 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PRORYQ9H606 182 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 CNNM2Q9H8M5 875 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 TRPV4Q9HBA0 871 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 FSCN3Q9NQT6 498 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PCDHA10Q9Y5I2 948 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 ATMQ13315 3056 aa10.54□□□□□ -0.72
NEDD1-211ENST00000557454 PLXNB3Q9ULL4 1909 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 IPO5O00410 1097 aaKnown RBP10.53□□□□□ -0.72
NEDD1-211ENST00000557454 ZNF197O14709 1029 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 CAPN9O14815 690 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 ATG13O75143 517 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 RNF40O75150 1001 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 MOSPD3O75425 235 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 MICAL2O94851 1124 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 KIF4AO95239 1232 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 GJA1P17302 382 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 ITPKBP27987 946 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 FCHO2Q0JRZ9 810 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 UGCGQ16739 394 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 RTL10Q7L3V2 364 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 PLA2G4DQ86XP0 818 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 SMAP1Q8IYB5 467 aaPredicted RBP10.53□□□□□ -0.72
NEDD1-211ENST00000557454 TMEFF1Q8IYR6 380 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 CAMK1GQ96NX5 476 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 EIF2AQ9BY44 585 aaKnown RBP10.53□□□□□ -0.72
NEDD1-211ENST00000557454 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 NRBP2Q9NSY0 501 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 SUCLA2Q9P2R7 463 aaPredicted RBP10.53□□□□□ -0.72
NEDD1-211ENST00000557454 SAMM50Q9Y512 469 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 CDY1Q9Y6F8 540 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
NEDD1-211ENST00000557454 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TMEM150BA6NC51 233 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 FAM86B1E9PN63 330 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 PLEKHA8P1O95397 391 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 APBB3O95704 486 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 NTRK1P04629 796 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 FAM86B2P0C5J1 330 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 ZNF76P36508 570 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 DGKEP52429 567 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TNK2Q07912 1038 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TRIP6Q15654 476 aaKnown RBP10.52□□□□□ -0.73
NEDD1-211ENST00000557454 MTERF2Q49AM1 385 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 FSTL4Q6MZW2 842 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 PDXDC1Q6P996 788 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 GSTCDQ8NEC7 633 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 SH2D3AQ9BRG2 576 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 ZNF577Q9BSK1 485 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 GTPBP2Q9BX10 602 aaKnown RBP10.52□□□□□ -0.73
NEDD1-211ENST00000557454 TPSD1Q9BZJ3 242 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 SLITRK6Q9H5Y7 841 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 MINDY3Q9H8M7 445 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 PDCD11Q14690 1871 aaKnown RBP10.52□□□□□ -0.73
NEDD1-211ENST00000557454 ATXN2Q99700 1313 aaKnown RBP10.52□□□□□ -0.73
NEDD1-211ENST00000557454 MGAQ8IWI9 3026 aa10.52□□□□□ -0.73
NEDD1-211ENST00000557454 NBPF19A0A087WUL8 3843 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 IGKV6-21A0A0C4DH24 114 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 ARHGEF37A1IGU5 675 aa10.51□□□□□ -0.73
NEDD1-211ENST00000557454 CASTOR2A6NHX0 329 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms