RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 ZC2HC1CQ53FD0 456 aaPredicted RBP18.08■□□□□ 0.48
VSX1-207ENST00000557285 ALKAL1Q6UXT8 129 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 SFR1Q86XK3 245 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
VSX1-207ENST00000557285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.08■□□□□ 0.48
VSX1-207ENST00000557285 TBC1D7Q9P0N9 293 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 STK17AQ9UEE5 414 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.48
VSX1-207ENST00000557285 NR2E1Q9Y466 385 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 A0A087X0B3 334 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 MYMKA6NI61 221 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 C2CD4DB7Z1M9 353 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 SPTLC2O15270 562 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 TGM5O43548 720 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 RFPL2O75678 378 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 TNFSF9P41273 254 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 BRCC3P46736 316 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 NASPP49321 788 aaPredicted RBP18.07■□□□□ 0.48
VSX1-207ENST00000557285 MCL1Q07820 350 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 UPP1Q16831 310 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
VSX1-207ENST00000557285 ZBTB41Q5SVQ8 909 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 ELMSAN1Q6PJG2 1045 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 DCLRE1AQ6PJP8 1040 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 DDX12PQ92771 950 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 UROC1Q96N76 676 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 SLC38A7Q9NVC3 462 aa18.07■□□□□ 0.48
VSX1-207ENST00000557285 PDCD11Q14690 1871 aaKnown RBP18.07■□□□□ 0.48
VSX1-207ENST00000557285 CCDC195A0A1B0GUA6 201 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 PODXLO00592 558 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 GPR37L1O60883 481 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 ZSCAN22P10073 491 aaPredicted RBP18.06■□□□□ 0.48
VSX1-207ENST00000557285 IDEP14735 1019 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 CREMQ03060 361 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 ELAVL2Q12926 359 aaKnown RBP18.06■□□□□ 0.48
VSX1-207ENST00000557285 PKP1Q13835 747 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 SLC10A6Q3KNW5 377 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 XKR4Q5GH76 650 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 GPR149Q86SP6 731 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 TDRD5Q8NAT2 981 aaKnown RBP18.06■□□□□ 0.48
VSX1-207ENST00000557285 CNTN3Q9P232 1028 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 FNIP2Q9P278 1114 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 TUBGCP4Q9UGJ1 667 aa18.06■□□□□ 0.48
VSX1-207ENST00000557285 MTCL1Q9Y4B5 1905 aaKnown RBP18.06■□□□□ 0.48
VSX1-207ENST00000557285 TISP43B9A030 160 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 ADAM12O43184 909 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 F13A1P00488 732 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 KCNE1P15382 129 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 TKTP29401 623 aaKnown RBP18.05■□□□□ 0.48
VSX1-207ENST00000557285 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
VSX1-207ENST00000557285 LNX1Q8TBB1 728 aaPredicted RBP18.05■□□□□ 0.48
VSX1-207ENST00000557285 PIK3R5Q8WYR1 880 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 STAMQ92783 540 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 KIF12Q96FN5 646 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 CLSTN3Q9BQT9 956 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 MSTO1Q9BUK6 570 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 MRPL44Q9H9J2 332 aaKnown RBP18.05■□□□□ 0.48
VSX1-207ENST00000557285 PIDD1Q9HB75 910 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 NUB1Q9Y5A7 615 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 DENND4AQ7Z401 1863 aa18.05■□□□□ 0.48
VSX1-207ENST00000557285 ANKRD63C9JTQ0 380 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 TMEM189-UBE2V1I3L0A0 370 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 TRAPPC3O43617 180 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 CLTAP09496 248 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 SLC39A4Q6P5W5 647 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 CD300LGQ6UXG3 332 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 CCDC149Q6ZUS6 474 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 KREMEN2Q8NCW0 462 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 SMG7Q92540 1137 aaKnown RBP18.04■□□□□ 0.48
VSX1-207ENST00000557285 DDX27Q96GQ7 796 aaKnown RBP18.04■□□□□ 0.48
VSX1-207ENST00000557285 FIZ1Q96SL8 496 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 DPP7Q9UHL4 492 aa18.04■□□□□ 0.48
VSX1-207ENST00000557285 MYO10Q9HD67 2058 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 LACTBL1A8MY62 500 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 OGTO15294 1046 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 ASGR2P07307 311 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 FGFR3P22607 806 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 MCM4P33991 863 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 OR1D2P34982 312 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 GUCY2FP51841 1108 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 GTF2BQ00403 316 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 MAP4K3Q8IVH8 894 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 EDAQ92838 391 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 DHX58Q96C10 678 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 DNAJC19Q96DA6 116 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 RPF1Q9H9Y2 349 aaKnown RBP18.03■□□□□ 0.48
VSX1-207ENST00000557285 LIMD1Q9UGP4 676 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 CDY1Q9Y6F8 540 aa18.03■□□□□ 0.48
VSX1-207ENST00000557285 A0A0B4J269 797 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 PRR33A8MZF0 331 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 GCNT3O95395 438 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 YEATS4O95619 227 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms