RNA–Protein interactions for RNA: ENST00000557165.5

CCNK-208, Transcript of cyclin K, human

TSL 5

Gene CCNK, Length 955 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNK-208	ENST00000557165	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	RPUSD2	Q8IZ73	545 aa	Known RBP	12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	ANKRD13C	Q8N6S4	541 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	LINC01465	Q8N7H1	131 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	RNF149	Q8NC42	400 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	WHAMM	Q8TF30	809 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	COG1	Q8WTW3	980 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	CAVIN3	Q969G5	261 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	CAPZA3	Q96KX2	299 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	RHOXF2	Q9BQY4	288 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	SH2D3A	Q9BRG2	576 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	PACSIN1	Q9BY11	444 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	UBXN6	Q9BZV1	441 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	VRTN	Q9H8Y1	702 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	CPSF3	Q9UKF6	684 aa	Known RBP	12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	SCIN	Q9Y6U3	715 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	KAT6A	Q92794	2004 aa		12.82	□□□□□ -0.36
CCNK-208	ENST00000557165	ANK1	P16157	1881 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	KCNK3	O14649	394 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	FAM189A1	O60320	539 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	C22orf31	O95567	290 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	STAU1	O95793	577 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	ASS1	P00966	412 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	TNNC2	P02585	160 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	LGALS2	P05162	132 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	PGK2	P07205	417 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	CLTA	P09496	248 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	P4HA1	P13674	534 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	CTNNA2	P26232	953 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	MAN1A1	P33908	653 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	NLRP11	P59045	1033 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	FMO1	Q01740	532 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	FSTL1	Q12841	308 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	PTP4A2	Q12974	167 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	BIRC3	Q13489	604 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	ENOX2	Q16206	610 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	DGKD	Q16760	1214 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	CLEC16A	Q2KHT3	1053 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	LIN9	Q5TKA1	542 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	ATF7IP2	Q5U623	682 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	WDR78	Q5VTH9	848 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	TDRD10	Q5VZ19	366 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	DPP9	Q86TI2	863 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	FBXO16	Q8IX29	292 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	DDX1	Q92499	740 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	SEMA4D	Q92854	862 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	ANKRD36BP1	Q96IX9	119 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	PNKP	Q96T60	521 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	TARS2	Q9BW92	718 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	INO80B	Q9C086	356 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	DNAI2	Q9GZS0	605 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	PTPRH	Q9HD43	1115 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	SEPT11	Q9NVA2	429 aa	Known RBP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	TFR2	Q9UP52	801 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	DERA	Q9Y315	318 aa		12.81	□□□□□ -0.36
CCNK-208	ENST00000557165	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CCNK-208	ENST00000557165		A6NNZ2	444 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	TMCO5B	A8MYB1	307 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	PDE2A	O00408	941 aa	Predicted RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	CYP26A1	O43174	497 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	BUB1B	O60566	1050 aa	Predicted RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	SRGAP2	O75044	1071 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	PHACTR2	O75167	634 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	FTCD	O95954	541 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	NOP14	P78316	857 aa	Known RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	NCOA4	Q13772	614 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	DHX34	Q14147	1143 aa	Known RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	DCAF4L1	Q3SXM0	396 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	TUBB8	Q3ZCM7	444 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	EFCAB12	Q6NXP0	572 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	GPR142	Q7Z601	462 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	NOP9	Q86U38	636 aa	Known RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	PHF13	Q86YI8	300 aa	Predicted RBP	12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	MREG	Q8N565	214 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	SOCS4	Q8WXH5	440 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	BRI3BP	Q8WY22	251 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	MAML3	Q96JK9	1138 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	ADPGK	Q9BRR6	497 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	TINF2	Q9BSI4	451 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	TCHP	Q9BT92	498 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	NIF3L1	Q9GZT8	377 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	KATNBL1	Q9H079	304 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	MIS12	Q9H081	205 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	RAB17	Q9H0T7	212 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	HOMER3	Q9NSC5	361 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	CTTNBP2NL	Q9P2B4	639 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	ANKFY1	Q9P2R3	1169 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	C2CD2	Q9Y426	696 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	CEP83	Q9Y592	693 aa		12.8	□□□□□ -0.36
CCNK-208	ENST00000557165	FAM187A	A6NFU0	413 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	ABLIM1	O14639	778 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	ZNF185	O15231	689 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	MED7	O43513	233 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	KPNA6	O60684	536 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	CYP1A1	P04798	512 aa	Predicted RBP	12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	UNG	P13051	313 aa	Predicted RBP	12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	AXL	P30530	894 aa		12.79	□□□□□ -0.36
CCNK-208	ENST00000557165	NSF	P46459	744 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms