RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 RARAP10276 462 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 RALAP11233 206 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 BRD2P25440 801 aaKnown RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 MDH1P40925 334 aaKnown RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 ZNF844Q08AG5 666 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 SLC13A5Q86YT5 568 aaPredicted RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 RBBP8NLQ8NC74 664 aaPredicted RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 VPS37BQ9H9H4 285 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 ANAPC5Q9UJX4 755 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 KYNUQ16719 465 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 CDO1Q16878 200 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 MAP4K3Q8IVH8 894 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 OR5B17Q8NGF7 314 aa16.36■□□□□ 0.21
TMEM55B-207ENST00000557041 KRT1P04264 644 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 PSMC4P43686 418 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 NLRP14Q86W24 1093 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 A0A0A6YYK5 440 aaPredicted RBP16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 PHF2O75151 1096 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 OATP04181 439 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 CHRNA3P32297 505 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 GTF2H1P32780 548 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 CLCN3P51790 818 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 SP2Q02086 613 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 KIF22Q14807 665 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 MAPK6Q16659 721 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 ZNF568Q3ZCX4 644 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 DNAJC24Q6P3W2 148 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 PRELID2Q8N945 189 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 COPS5Q92905 334 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 TEPSINQ96N21 525 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 CHST7Q9NS84 486 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 CFHP08603 1231 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 TNFSF9P41273 254 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 PPP2R2AP63151 447 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 WDR72Q3MJ13 1102 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 FBXW10Q5XX13 1052 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 TMC3Q7Z5M5 1100 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 SPATA33Q96N06 139 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 GPR88Q9GZN0 384 aa16.35■□□□□ 0.21
TMEM55B-207ENST00000557041 UMODL1Q5DID0 1318 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 SGK1O00141 431 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 RFX1P22670 979 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 PTENP60484 403 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 KCNT1Q5JUK3 1230 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 ACAD10Q6JQN1 1059 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 SLC9A9Q8IVB4 645 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 FBXO16Q8IX29 292 aaPredicted RBP16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 SLC17A8Q8NDX2 589 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 C10orf88Q9H8K7 445 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 DDX3YO15523 660 aaKnown RBP16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 PIAS1O75925 651 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 MUTP22033 750 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 BPIFB4P59827 614 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 IFI35P80217 286 aaPredicted RBP16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 ZC3H3Q8IXZ2 948 aaKnown RBP16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 FAM71AQ8IYT1 594 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 CEP120Q8N960 986 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 MCEEQ96PE7 176 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 CALN1Q9BXU9 219 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 GTF3C4Q9UKN8 822 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
TMEM55B-207ENST00000557041 MAP3K6O95382 1288 aa16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 KRT15P19012 456 aa16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 COILP38432 576 aaPredicted RBP16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 GRM1Q13255 1194 aa16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 PPP2R5EQ16537 467 aa16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 C1orf131Q8NDD1 294 aaKnown RBP16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 ELAC2Q9BQ52 826 aaKnown RBP16.33■□□□□ 0.21
TMEM55B-207ENST00000557041 O00370 1275 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 CHRNB2P17787 502 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 ANXA13P27216 316 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 Q3C1V9 767 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 SESTD1Q86VW0 696 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 APOBEC3FQ8IUX4 373 aaKnown RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 KCTD17Q8N5Z5 321 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 DDX23Q9BUQ8 820 aaKnown RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 ZNF214Q9UL59 606 aaPredicted RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 EXTL3O43909 919 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 GRAP2O75791 330 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms