RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 EYA4O95677 639 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 LY86O95711 162 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 TNNT2P45379 298 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 MTHFSP49914 203 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 DGCR2P98153 550 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 AMPD3Q01432 767 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 HHEXQ03014 270 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PTH1RQ03431 593 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PPARAQ07869 468 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 HDAC1Q13547 482 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 SPIDRQ14159 915 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 RRP1BQ14684 758 aaKnown RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 FNDC7Q5VTL7 733 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 FTSJ3Q8IY81 847 aaKnown RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 THEMISQ8N1K5 641 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 ANKRD35Q8N283 1001 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 WDR66Q8TBY9 1149 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 COG1Q8WTW3 980 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 GAB3Q8WWW8 586 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 CHMP4AQ9BY43 222 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 C22orf23Q9BZE7 217 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 BRINP2Q9C0B6 783 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PCED1AQ9H1Q7 454 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PNNQ9H307 717 aaKnown RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PRDM12Q9H4Q4 367 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PCDH12Q9NPG4 1184 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 PRSS50Q9UI38 385 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 DDX19BQ9UMR2 479 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 EDARQ9UNE0 448 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 COL3A1P02461 1466 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-246ENST00000557030 KIF16BQ96L93 1317 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 DLC1Q96QB1 1528 aa5.68□□□□□ -1.5
ATXN3-246ENST00000557030 NRXN3Q9Y4C0 1643 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 MED14O60244 1454 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 GOLGA8BA8MQT2 603 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 CYP27B1O15528 508 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 POU3F3P20264 500 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-246ENST00000557030 SCNN1GP51170 649 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 TRIM25Q14258 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-246ENST00000557030 PITRM1Q5JRX3 1037 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 KRT40Q6A162 431 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 Q6ZRM9 215 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 TAS1R1Q7RTX1 841 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 ANKRD13AQ8IZ07 590 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 ZCRB1Q8TBF4 217 aaKnown RBP5.67□□□□□ -1.5
ATXN3-246ENST00000557030 TGFBRAP1Q8WUH2 860 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 RSAD2Q8WXG1 361 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 SNX21Q969T3 373 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 EAF2Q96CJ1 260 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-246ENST00000557030 UIMC1Q96RL1 719 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 CDK19Q9BWU1 502 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 ING3Q9NXR8 418 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 NCDNQ9UBB6 729 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 IL16Q14005 1332 aa5.67□□□□□ -1.5
ATXN3-246ENST00000557030 KLRG2A4D1S0 409 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 GOLGA8AA7E2F4 631 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 NPIPB8E9PQR5 432 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 FYB1O15117 783 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 IPO8O15397 1037 aaKnown RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 GPR39O43194 453 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 XRCC6P12956 609 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 XPAP23025 273 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 GDF5P43026 501 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 LGALS4P56470 323 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 SCAND1P57086 179 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 MGAT5Q09328 741 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 ELAVL1Q15717 326 aaKnown RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 FKBP15Q5T1M5 1219 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 NAIF1Q69YI7 327 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 DDX42Q86XP3 938 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 MDGA1Q8NFP4 955 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 ZNF512Q96ME7 567 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 KCTD10Q9H3F6 313 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 EVLQ9UI08 416 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 VIRMAQ69YN4 1812 aaKnown RBP5.66□□□□□ -1.5
ATXN3-246ENST00000557030 ADGRB2O60241 1585 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 XDHP47989 1333 aa5.66□□□□□ -1.5
ATXN3-246ENST00000557030 NCOA3Q9Y6Q9 1424 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 ANKRD26Q9UPS8 1709 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 RRP9O43818 475 aaKnown RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 STC2O76061 302 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 ALDH1A2O94788 518 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 PRKD3O94806 890 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 CFBP00751 764 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 IBSPP21815 317 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 UGT8Q16880 541 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 MFSD5Q6N075 450 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 SPATS2Q86XZ4 545 aaKnown RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 SMC5Q8IY18 1101 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 MSL3Q8N5Y2 521 aaKnown RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 NAP1L5Q96NT1 182 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 PLEKHG4BQ96PX9 1271 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 PLEKHF1Q96S99 279 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 QRSL1Q9H0R6 528 aaKnown RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 RRAGDQ9NQL2 400 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 SRRDQ9UH36 339 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms