RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TBC1D1Q86TI0 1168 aaPredicted RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 STX19Q8N4C7 294 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 ARHGAP10A1A4S6 786 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 E9PMD0 336 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 ANP32DO95626 131 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 CYP4F22Q6NT55 531 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 GPC2Q8N158 579 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ATPAF2Q8N5M1 289 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 DESI2Q9BSY9 194 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■□□□□ 10.9
NEK9-210ENST00000557026 ADORA2BP29275 332 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ALKBH8Q96BT7 664 aaKnown RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 POTEMA6NI47 508 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 GNRH1P01148 92 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 CYFIP1Q7L576 1253 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 CCNJLQ8IV13 435 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 C11orf70Q9BRQ4 267 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 HNRNPCL2B2RXH8 293 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 DYRK3O43781 588 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ALDH1A2O94788 518 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 AMHP03971 560 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ATICP31939 592 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 BACE1P56817 501 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 ACTR2P61160 394 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 PHKG1Q16816 387 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 NBPF15Q8N660 670 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 DHX35Q9H5Z1 703 aaKnown RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
NEK9-210ENST00000557026 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
NEK9-210ENST00000557026 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEK9-210ENST00000557026 PTK6Q13882 451 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 DPCR1Q3MIW9 517 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PDCD6IPQ8WUM4 868 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HGSO14964 777 aaPredicted RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 RPA1P27694 616 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 LHX1P48742 406 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 SULT1E1P49888 294 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 NAA25Q14CX7 972 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HIST2H2ACQ16777 129 aaPredicted RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HIST2H2AA3Q6FI13 130 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HERC6Q8IVU3 1022 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PPWD1Q96BP3 646 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 TSPAN18Q96SJ8 248 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 UXTQ9UBK9 157 aaPredicted RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 CLTCQ00610 1675 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 XYLBO75191 536 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 FAM200BP0CF97 657 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HDAC4P56524 1084 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PRKCEQ02156 737 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 ZNF280DQ6N043 979 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 TAS2R42Q7RTR8 314 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 NUP85Q9BW27 656 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 EPHB3P54753 998 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 RRM2BQ7LG56 351 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
NEK9-210ENST00000557026 SLC20A1Q8WUM9 679 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 MRIQ9BWK5 157 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 NDFIP2Q9NV92 336 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
NEK9-210ENST00000557026 PLSCR1O15162 318 aa12.6□□□□□ -0.39
NEK9-210ENST00000557026 ANXA9O76027 345 aa12.6□□□□□ -0.39
NEK9-210ENST00000557026 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
NEK9-210ENST00000557026 SNX1Q13596 522 aa12.6□□□□□ -0.39
NEK9-210ENST00000557026 PEX6Q13608 980 aa12.6□□□□□ -0.39
NEK9-210ENST00000557026 POLD3Q15054 466 aaPredicted RBP12.6□□□□□ -0.39
NEK9-210ENST00000557026 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
NEK9-210ENST00000557026 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms