RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CCDC62Q6P9F0 684 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 PASD1Q8IV76 773 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 ZDHHC14Q8IZN3 488 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 CPA5Q8WXQ8 436 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-211ENST00000556648 ZIM3Q96PE6 472 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 AZI2Q9H6S1 392 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 NUB1Q9Y5A7 615 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CCDC188H7C350 402 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ABLIM1O14639 778 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CLSTN1O94985 981 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 FLT3P36888 993 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 NNTQ13423 1086 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 WDR44Q5JSH3 913 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CDCA2Q69YH5 1023 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 USP50Q70EL3 339 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CDR2LQ86X02 465 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 RNF149Q8NC42 400 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CD101Q93033 1021 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 EXOC4Q96A65 974 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ARL8AQ96BM9 186 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CARD9Q9H257 536 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CNOT8Q9UFF9 292 aaKnown RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 TTC7AQ9ULT0 858 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 MGAMO43451 1857 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 B4GALT5O43286 388 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 DAPK3O43293 454 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PRKCBP05771 671 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CLTAP09496 248 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PYGMP11217 842 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 UNGP13051 313 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ABCD1P33897 745 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PEX5P50542 639 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CLCN3P51790 818 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 CUL2Q13617 745 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 HLTFQ14527 1009 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 TTMPQ5BVD1 217 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 DAB2IPQ5VWQ8 1189 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ENOSF1Q7L5Y1 443 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 DHX37Q8IY37 1157 aaKnown RBP10.85□□□□□ -0.67
TMEM260-211ENST00000556648 FAM167AQ96KS9 214 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PPP1R16BQ96T49 567 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 SH3GL2Q99962 352 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 TRIM31Q9BZY9 425 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 DPH5Q9H2P9 285 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PCDHB4Q9Y5E5 795 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 PLXNB2O15031 1838 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
TMEM260-211ENST00000556648 IGKV6-21A0A0C4DH24 114 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 TXNP10599 105 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 RRM1P23921 792 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 NOP14P78316 857 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 LLGL1Q15334 1064 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 IER5Q5VY09 327 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 EEF1DP3Q658K8 133 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 FASTKD5Q7L8L6 764 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 RHPN2Q8IUC4 686 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 BRSK2Q8IWQ3 736 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 MCOLN2Q8IZK6 566 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 MORC4Q8TE76 937 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 CYFIP2Q96F07 1278 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 NLRP4Q96MN2 994 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 MRPL4Q9BYD3 311 aaKnown RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 MTMR12Q9C0I1 747 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 CLDN3O15551 220 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 SPOPO43791 374 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 HSF2BPO75031 334 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 GJB6O95452 261 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 CST3P01034 146 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 PTENP60484 403 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 IGBP1P78318 339 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 NCOA4Q13772 614 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 LDLRAD1Q5T700 205 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 TTC27Q6P3X3 843 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 ARMCX2Q7L311 632 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 ARMC9Q7Z3E5 817 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 UBL4BQ8N7F7 174 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 PRELID2Q8N945 189 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 CEP120Q8N960 986 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 RBBP8NLQ8NC74 664 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-211ENST00000556648 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
TMEM260-211ENST00000556648 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms