RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TRIM71Q2Q1W2 868 aaKnown RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 DCAF4L1Q3SXM0 396 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ATRIPQ8WXE1 791 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 CCDC42Q96M95 316 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 OSBPL7Q9BZF2 842 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 EIF3CLB5ME19 914 aaKnown RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 M0QZ92 97 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ZNF263O14978 683 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ZSCAN12O43309 604 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 MYCP01106 439 aaPredicted RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 CTSHP09668 335 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 CCDC175P0C221 793 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 CYLC1P35663 651 aaPredicted RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ASIC2Q16515 512 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 UBXN11Q5T124 520 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 NYAP1Q6ZVC0 841 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 PPM1KQ8N3J5 372 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 EIF3CQ99613 913 aaKnown RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ASB7Q9H672 318 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 EVI5O60447 810 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 GFPT2O94808 682 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 LCA5LO95447 670 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 THPOP40225 353 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 KIF11P52732 1056 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 TFAMQ00059 246 aaKnown RBP11.68□□□□□ -0.54
LINC01550-206ENST00000556462 PTK2Q05397 1052 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 NCOA4Q13772 614 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 TDRD12Q587J7 1177 aaKnown RBP11.68□□□□□ -0.54
LINC01550-206ENST00000556462 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 SNTG2Q9NY99 539 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 HES2Q9Y543 173 aa11.68□□□□□ -0.54
LINC01550-206ENST00000556462 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 DNM1LO00429 736 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CCP110O43303 1012 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 NFICP08651 508 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CCL5P13501 91 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 FERP16591 822 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 GCNT1Q02742 428 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 FAM26DQ5JW98 314 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 JADE1Q6IE81 842 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 SPOPLQ6IQ16 392 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ZNF571Q7Z3V5 609 aaPredicted RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 SHC3Q92529 594 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 C16orf45Q96MC5 204 aaPredicted RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CXCL16Q9H2A7 254 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 AGO3Q9H9G7 860 aaKnown RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 APOBEC3GQ9HC16 384 aaKnown RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 OGDHLQ9ULD0 1010 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ST3GAL5Q9UNP4 418 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 BZW2Q9Y6E2 419 aaKnown RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ARVCFO00192 962 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 PHACTR2O75167 634 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ABL1P00519 1130 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 TMEM191BP0C7N4 346 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CDK7P50613 346 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 MFAP3P55082 362 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CYP27A1Q02318 531 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 WDR44Q5JSH3 913 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ALKAL1Q6UXT8 129 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 APBB1IPQ7Z5R6 666 aaPredicted RBP11.67□□□□□ -0.54
LINC01550-206ENST00000556462 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 OLIG1Q8TAK6 271 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 CXorf38Q8TB03 319 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 SYT11Q9BT88 431 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 ADAMTS1Q9UHI8 967 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 NOD1Q9Y239 953 aa11.67□□□□□ -0.54
LINC01550-206ENST00000556462 FRMPD3Q5JV73 1810 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 A0A087X0T9 212 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 AKR1B10O60218 316 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 FAM228BP0C875 321 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 MYL6P60660 151 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 KRT83P78385 493 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 GFPT1Q06210 699 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 NFX1Q12986 1120 aaKnown RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 FBXO47Q5MNV8 452 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ZNF618Q5T7W0 954 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 CD302Q8IX05 232 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms