RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CASP5P51878 434 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 YARSP54577 528 aaKnown RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 CBX2Q14781 532 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 ENOX2Q16206 610 aaKnown RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 USP41Q3LFD5 358 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 FAM171A1Q5VUB5 890 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 RSPO2Q6UXX9 243 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 SPATA31D4Q6ZUB0 917 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 ZNF720Q7Z2F6 126 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 APBB1IPQ7Z5R6 666 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 PALB2Q86YC2 1186 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 MAP4K3Q8IVH8 894 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 TMEM87AQ8NBN3 555 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 GLIS3Q8NEA6 775 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 ZSWIM2Q8NEG5 633 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 LNX1Q8TBB1 728 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 DHX58Q96C10 678 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 RPGRIP1Q96KN7 1286 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 PHF7Q9BWX1 381 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 STRA6Q9BX79 667 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 ADAM7Q9H2U9 754 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 POMKQ9H5K3 350 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 C11orf16Q9NQ32 467 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 STK39Q9UEW8 545 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 TUBGCP4Q9UGJ1 667 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 KCNG1Q9UIX4 513 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 PCDHA7Q9UN72 937 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 MYH11P35749 1972 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 TRIP11Q15643 1979 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 SF3B1O75533 1304 aaKnown RBP eCLIP8.85□□□□□ -0.99
VTI1B-206ENST00000556461 A0A0B4J269 797 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TTC26A0AVF1 554 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 LACTBL1A8MY62 500 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 PI4K2BG5E9Z4 385 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 H0YCG3 227 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TMEM189-UBE2V1I3L0A0 370 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 PODXLO00592 558 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 HNRNPDLO14979 420 aaKnown RBP8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TGM5O43548 720 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 RFPL2O75678 378 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 B3GAT3O94766 335 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 IDEP14735 1019 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TKTP29401 623 aaKnown RBP8.85□□□□□ -0.99
VTI1B-206ENST00000556461 CASP1P29466 404 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 ADSSP30520 456 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 KIAA1841Q6NSI8 718 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 LILRA6Q6PI73 481 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 DCLRE1AQ6PJP8 1040 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 PPFIBP1Q86W92 1011 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 CEP57Q86XR8 500 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 CLSTN3Q9BQT9 956 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TTPALQ9BTX7 342 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 ST6GALNAC4Q9H4F1 302 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 MAN1C1Q9NR34 630 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 TOPORSQ9NS56 1045 aaPredicted RBP8.85□□□□□ -0.99
VTI1B-206ENST00000556461 DZANK1Q9NVP4 752 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 MUTYHQ9UIF7 546 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 RCOR1Q9UKL0 485 aa8.85□□□□□ -0.99
VTI1B-206ENST00000556461 C2CD4DB7Z1M9 353 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PPEF2O14830 753 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 OGTO15294 1046 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PRPF6O94906 941 aaKnown RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 GLUD1P00367 558 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ADH1AP07327 375 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 CLTAP09496 248 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 GAP43P17677 238 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 FGFR3P22607 806 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ME1P48163 572 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ACOT2P49753 483 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PLXNA3P51805 1871 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 WNT7BP56706 349 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ITIH3Q06033 890 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ZBTB6Q15916 424 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PSMD5Q16401 504 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 HERC4Q5GLZ8 1057 aaPredicted RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 RESP18Q5W5W9 173 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 CRELD2Q6UXH1 353 aaPredicted RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 GPR149Q86SP6 731 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 GRAMD1CQ8IYS0 662 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 KCNG4Q8TDN1 519 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PIK3R5Q8WYR1 880 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 ZNF707Q96C28 371 aaPredicted RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 FAM84AQ96KN4 292 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 UROC1Q96N76 676 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 MSTO1Q9BUK6 570 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 SFXN1Q9H9B4 322 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 MRPL44Q9H9J2 332 aaKnown RBP8.84□□□□□ -0.99
VTI1B-206ENST00000556461 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 PANK4Q9NVE7 773 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 KBTBD4Q9NVX7 518 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 FNIP2Q9P278 1114 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 RAPGEFL1Q9UHV5 662 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 CPSF3Q9UKF6 684 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms