RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 BMS1Q14692 1282 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 PUM3Q15397 648 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ELF2Q15723 593 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 FILIP1LQ4L180 1135 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 LRRC24Q50LG9 513 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SLC9C2Q5TAH2 1124 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 TMCO3Q6UWJ1 677 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 LDHAL6AQ6ZMR3 332 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ADGRG2Q8IZP9 1017 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 FAM169BQ8N8A8 192 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ZBTB38Q8NAP3 1195 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ANKRD20A12PQ8NF67 263 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 UBXN4Q92575 508 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SMARCE1Q969G3 411 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 OSBP2Q969R2 916 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 PYM1Q9BRP8 204 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ISCA1Q9BUE6 129 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SLC26A6Q9BXS9 759 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 GPRC5CQ9NQ84 441 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 TOMM22Q9NS69 142 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 DNAI1Q9UI46 699 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 COA3Q9Y2R0 106 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 DUSP10Q9Y6W6 482 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 MAST2Q6P0Q8 1798 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 PAPPA2Q9BXP8 1791 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 MROH7-TTC4A0A0A0MT08 1334 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 MROH5Q6ZUA9 1318 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SYNRGQ9UMZ2 1314 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 NID2Q14112 1375 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 IFIT3O14879 490 aaKnown RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 HGSO14964 777 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 MEFVO15553 781 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ARHGAP6O43182 974 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TADA3O75528 432 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 URI1O94763 535 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 FGAP02671 866 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CAPNS1P04632 268 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ADORA1P30542 326 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CASQ1P31415 396 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 EPHX2P34913 555 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CYP4F3Q08477 520 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 WTAPQ15007 396 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 SLC39A14Q15043 492 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 UBE3CQ15386 1083 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TBC1D10BQ4KMP7 808 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 RILPL1Q5EBL4 403 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 MBLAC2Q68D91 279 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 KRT40Q6A162 431 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TTLL5Q6EMB2 1281 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 APOA5Q6Q788 366 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CD300LDQ6UXZ3 194 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 SYT10Q6XYQ8 523 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CEP68Q76N32 757 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 MILR1Q7Z6M3 343 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 RAB11FIP4Q86YS3 637 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TRIML1Q8N9V2 468 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 MLKLQ8NB16 471 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 SLC17A8Q8NDX2 589 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TRMT2BQ96GJ1 504 aaKnown RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TMEM169Q96HH4 297 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 UBAC1Q9BSL1 405 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 PLA2G12BQ9BX93 195 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 TAOK3Q9H2K8 898 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ACBD3Q9H3P7 528 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 CCSER2Q9H7U1 834 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 RXFP1Q9HBX9 757 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ACTR10Q9NZ32 417 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 SRP68Q9UHB9 627 aaKnown RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 HACL1Q9UJ83 578 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ZHX1Q9UKY1 873 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF215Q9UL58 517 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ASAP1Q9ULH1 1129 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF541Q9H0D2 1346 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF532Q9HCE3 1301 aa4.94□□□□□ -1.62
ATXN3-241ENST00000556374 LAMB1P07942 1786 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 B4E1Z4 1266 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PDE8AO60658 829 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 EIF3JO75822 258 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 DEXIO95424 95 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 A1BGP04217 495 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 CHGBP05060 677 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PDE6AP16499 860 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 MARCKSP29966 332 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 LTBRP36941 435 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 IGHMBP2P38935 993 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 RCAN1P53805 252 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 LSAMPQ13449 338 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 POSTNQ15063 836 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PPP2R5BQ15173 497 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 FXNQ16595 210 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 INF2Q27J81 1249 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 ARHGAP29Q52LW3 1261 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 RRP12Q5JTH9 1297 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 JAKMIP3Q5VZ66 844 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 RESP18Q5W5W9 173 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 RSPO2Q6UXX9 243 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms