RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 FKBP1CQ5VVH2 108 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 MRM1Q6IN84 353 aaKnown RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 APOBEC3HQ6NTF7 200 aaKnown RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 TCTN3Q6NUS6 607 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 CDC42EP5Q6NZY7 148 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 GADL1Q6ZQY3 521 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 OTOP3Q7RTS5 596 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 TAX1BP1Q86VP1 789 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 RAET1EQ8TD07 263 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 FAM151AQ8WW52 585 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 CLEC4DQ8WXI8 215 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 BRI3BPQ8WY22 251 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 GCC1Q96CN9 775 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 C1orf159Q96HA4 380 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 NOL10Q9BSC4 688 aaKnown RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 EPN3Q9H201 632 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 HSPBP1Q9NZL4 362 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 ING1Q9UK53 422 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 PA2G4Q9UQ80 394 aaKnown RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 LRRFIP2Q9Y608 721 aaKnown RBP4.74□□□□□ -1.65
ATXN3-240ENST00000556339 SLC4A7Q9Y6M7 1214 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 THSD7BQ9C0I4 1608 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 ECM29Q5VYK3 1845 aa4.74□□□□□ -1.65
ATXN3-240ENST00000556339 TNRC18O15417 2968 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PDHXO00330 501 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 FOXS1O43638 330 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 TLR2O60603 784 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 MSCO60682 206 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 CIAO1O76071 339 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 GJB6O95452 261 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 KNG1P01042 644 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 LTFP02788 710 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 COL6A2P12110 1019 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 EN2P19622 333 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 FGFR2P21802 821 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 COMTP21964 271 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 CSF2RBP32927 897 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 GRIA2P42262 883 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PSMC4P43686 418 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PHKA1P46020 1223 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 RGS3P49796 1198 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 GSTO1P78417 241 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PFKPQ01813 784 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PPATQ06203 517 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 ABHD18Q0P651 414 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PPIL2Q13356 520 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PICALMQ13492 652 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 BECN1Q14457 450 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 KIZQ2M2Z5 673 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 SLC10A6Q3KNW5 377 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 USP39Q53GS9 565 aaKnown RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 CD276Q5ZPR3 534 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 FASTKD5Q7L8L6 764 aaKnown RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 ATG9AQ7Z3C6 839 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 PROSER1Q86XN7 944 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 REXO1L1PQ8IX06 675 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 FAM43AQ8N2R8 423 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 AJUBAQ96IF1 538 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 TACO1Q9BSH4 297 aaKnown RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 CHMP4BQ9H444 224 aaKnown RBP4.73□□□□□ -1.65
ATXN3-240ENST00000556339 RAI14Q9P0K7 980 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 CPA4Q9UI42 421 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 DSEQ9UL01 958 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 NPFFR2Q9Y5X5 522 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 ZHX2Q9Y6X8 837 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 MYH2Q9UKX2 1941 aa4.73□□□□□ -1.65
ATXN3-240ENST00000556339 DOCK3Q8IZD9 2030 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 CXCL11O14625 94 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 GNAI2P04899 355 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 PRDX5P30044 214 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 ADORA1P30542 326 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 RFX5P48382 616 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 RRADP55042 308 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 PRMT2P55345 433 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 UBXN2AP68543 259 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 TFCP2Q12800 502 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 FOXE3Q13461 319 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 HSP90AA2PQ14568 343 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 MVPQ14764 893 aaKnown RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 RSPO2Q6UXX9 243 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 RNF207Q6ZRF8 634 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 EP400NLQ6ZTU2 488 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 ANKRD23Q86SG2 305 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 CCAR1Q8IX12 1150 aaKnown RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 VGLL2Q8N8G2 317 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 UHMK1Q8TAS1 419 aaKnown RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 MICAL1Q8TDZ2 1067 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 SH3TC2Q8TF17 1288 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 NEIL1Q96FI4 390 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATXN3-240ENST00000556339 KCND1Q9NSA2 647 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 PTCH2Q9Y6C5 1203 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 MYH13Q9UKX3 1938 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 KIF16BQ96L93 1317 aa4.72□□□□□ -1.65
ATXN3-240ENST00000556339 A0A1B0GUL7 405 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ZNF839A8K0R7 811 aa4.71□□□□□ -1.66
ATXN3-240ENST00000556339 ENTPD3O75355 529 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms