RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 DHX38Q92620 1227 aaKnown RBP20.11■□□□□ 0.81
SDR39U1-218ENST00000556262 SYT11Q9BT88 431 aa20.11■□□□□ 0.81
SDR39U1-218ENST00000556262 ADAMTS10Q9H324 1103 aa20.11■□□□□ 0.81
SDR39U1-218ENST00000556262 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
SDR39U1-218ENST00000556262 CAPN6Q9Y6Q1 641 aa20.11■□□□□ 0.81
SDR39U1-218ENST00000556262 ENC1O14682 589 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 MOCS3O95396 460 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 ELNP15502 786 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 CACNB2Q08289 660 aaPredicted RBP20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 NAB2Q15742 525 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 GNASQ5JWF2 1037 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 RSRC2Q7L4I2 434 aaKnown RBP20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 ZNF410Q86VK4 478 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 VPS36Q86VN1 386 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 FAM71AQ8IYT1 594 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 SLC20A1Q8WUM9 679 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 SHC3Q92529 594 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 RABGGTAQ92696 567 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 NAPGQ99747 312 aaPredicted RBP20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 HDAC6Q9UBN7 1215 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 ANK1P16157 1881 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 TSPAN1O60635 241 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 GPR32O75388 356 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 CLCN6P51797 869 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 CEP112Q8N8E3 955 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 SLC30A5Q8TAD4 765 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 U2AF1L4Q8WU68 220 aaKnown RBP20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 DNAJB3Q8WWF6 145 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 GOLGA1Q92805 767 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 MTMR12Q9C0I1 747 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 LUC7LQ9NQ29 371 aaKnown RBP20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 C1orf112Q9NSG2 853 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 NENFQ9UMX5 172 aa20.1■□□□□ 0.81
SDR39U1-218ENST00000556262 SMIM35A0A1B0GVV1 85 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 CYP26A1O43174 497 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 BUB1O43683 1085 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 ERLIN2O94905 339 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 SGPL1O95470 568 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 CXCL8P10145 99 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 APLP1P51693 650 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 TMCO3Q6UWJ1 677 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 PALB2Q86YC2 1186 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 WDR49Q8IV35 697 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 VTI1AQ96AJ9 217 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 OSMRQ99650 979 aa20.09■□□□□ 0.81
SDR39U1-218ENST00000556262 TMCO5BA8MYB1 307 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 PHACTR2O75167 634 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 CST3P01034 146 aaPredicted RBP20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 ANXA13P27216 316 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 GJA9P57773 515 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 WDR44Q5JSH3 913 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 SLC47A2Q86VL8 602 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 EFCAB13Q8IY85 973 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 KATNAL1Q9BW62 490 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 APOBEC3GQ9HC16 384 aaKnown RBP20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 SEPT11Q9NVA2 429 aaKnown RBP20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 CDC23Q9UJX2 597 aa20.08■□□□□ 0.81
SDR39U1-218ENST00000556262 MEFVO15553 781 aaPredicted RBP20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 SEPT4O43236 478 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 ZC3H11AO75152 810 aaKnown RBP eCLIP20.08■□□□□ 0.89e-8■■□□□ 13.7
SDR39U1-218ENST00000556262 CLSTN1O94985 981 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 TFRCP02786 760 aaKnown RBP20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 STAG3L1P0CL83 205 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 CCND3P30281 292 aaPredicted RBP20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 FAM193AP78312 1265 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 TFAMQ00059 246 aaKnown RBP20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 NCOA4Q13772 614 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 CXCL17Q6UXB2 119 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 TXLNBQ8N3L3 684 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 CD99L2Q8TCZ2 262 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 AGPAT1Q99943 283 aa20.08■□□□□ 0.8
SDR39U1-218ENST00000556262 UMODL1Q5DID0 1318 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 CASP8AP2Q9UKL3 1982 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 C17orf102A2RUQ5 167 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 ATP1A1P05023 1023 aaKnown RBP20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 MCF2P10911 925 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 TNFAIP3P21580 790 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 HTRA3P83110 453 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 GCNT1Q02742 428 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 C10orf76Q5T2E6 689 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 TRAPPC11Q7Z392 1133 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 C7orf31Q8N865 590 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 RPF1Q9H9Y2 349 aaKnown RBP20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 ZNF446Q9NWS9 450 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 TAS2R14Q9NYV8 317 aa20.07■□□□□ 0.8
SDR39U1-218ENST00000556262 A0A1B0GUA9 196 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 CALCAP01258 141 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 RARBP10826 455 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 PRKAR2AP13861 404 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 NAP1L1P55209 391 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 DUOXA2Q1HG44 320 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 TAF3Q5VWG9 929 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 NOP9Q86U38 636 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 REM2Q8IYK8 340 aaPredicted RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 TMEM130Q8N3G9 435 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 EPS8L1Q8TE68 723 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms