RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 BCAR1P56945 870 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 ACAP1Q15027 740 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 PPM1JQ5JR12 505 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 CLLU1OSQ5K130 101 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 IFIT1BQ5T764 474 aaKnown RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 TTC39BQ5VTQ0 682 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 DCLRE1AQ6PJP8 1040 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 USP17L6PQ6QN14 398 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 DDX53Q86TM3 631 aaKnown RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 ECHDC2Q86YB7 292 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 PJA1Q8NG27 643 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 GPR152Q8TDT2 470 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 TMEM169Q96HH4 297 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 EPC1Q9H2F5 836 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 WDR6Q9NNW5 1121 aaKnown RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 ARHGEF3Q9NR81 526 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 SH2B1Q9NRF2 756 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 FNDC1Q4ZHG4 1894 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 CEP295Q9C0D2 2601 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SLC30A4O14863 429 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 LAMTOR5O43504 91 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 TBC1D4O60343 1298 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 HBP1O60381 514 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 GPR32O75388 356 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 ALX3O95076 343 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 ZSCAN20P17040 1043 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SLC26A2P50443 739 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 CLCN4P51793 760 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 STARD6P59095 220 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 CSTF1Q05048 431 aaKnown RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 MTMR1Q13613 665 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 PTPN14Q15678 1187 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 KIZQ2M2Z5 673 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 Q6ZS46 218 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 ZBTB44Q8NCP5 570 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 STAMQ92783 540 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 CUL5Q93034 780 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 IGSF21Q96ID5 467 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SHDQ96IW2 340 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 KLHL5Q96PQ7 755 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 OSMRQ99650 979 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 UBAC1Q9BSL1 405 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 BCO2Q9BYV7 579 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 RHOBTB2Q9BYZ6 727 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 PARD6AQ9NPB6 346 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 JADE2Q9NQC1 790 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SLC2A4RGQ9NR83 387 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SPATA6Q9NWH7 488 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 ZSCAN32Q9NX65 697 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SLC9A2Q9UBY0 812 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 SMG5Q9UPR3 1016 aaKnown RBP7.8□□□□□ -1.16
ATXN3-236ENST00000556220 UBIAD1Q9Y5Z9 338 aa7.8□□□□□ -1.16
ATXN3-236ENST00000556220 FANCMQ8IYD8 2048 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 A0A0U1RQF3 1178 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 KANSL1LA0AUZ9 987 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 CARNS1A5YM72 827 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 ANHXE9PGG2 379 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 LRRN2O75325 713 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 SMNDC1O75940 238 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-236ENST00000556220 GALTP07902 379 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 KLRC2P26717 231 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 SCNN1AP37088 669 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 DMWDQ09019 674 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 GRM4Q14833 912 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 SEC23AQ15436 765 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 CYP26C1Q6V0L0 522 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 TMEM173Q86WV6 379 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-236ENST00000556220 RNF169Q8NCN4 708 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 HELQQ8TDG4 1101 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 NELL1Q92832 810 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 MYADMQ96S97 322 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 MRPL9Q9BYD2 267 aaKnown RBP7.79□□□□□ -1.16
ATXN3-236ENST00000556220 KRT23Q9C075 422 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 ANGPTL2Q9UKU9 493 aa7.79□□□□□ -1.16
ATXN3-236ENST00000556220 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 FLNBO75369 2602 aaKnown RBP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 IGKV6D-21A0A0A0MT36 114 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 CCDC195A0A1B0GUA6 201 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 KIF4AO95239 1232 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 CNPP09543 421 aaKnown RBP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 LAMP2P13473 410 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 ACTR2P61160 394 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 WTAPQ15007 396 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 ZNF484Q5JVG2 852 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 PIBF1Q8WXW3 757 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 RSPH1Q8WYR4 309 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 DDX23Q9BUQ8 820 aaKnown RBP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 OSBPL6Q9BZF3 934 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 CNNM2Q9H8M5 875 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms