RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 A0A087X0T9 212 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 CCL15-CCL14A0A0B4J2E2 113 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TISP43B9A030 160 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 BTBD19C9JJ37 291 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 F8VZ95 297 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 EXTL3O43909 919 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ADCY3O60266 1144 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ARIH2O95376 493 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TUBBP07437 444 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 FAM228BP0C875 321 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TRIM49P0CI25 452 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TRIM49CP0CI26 452 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 CYP2C8P10632 490 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 GPC3P51654 580 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 EFNA5P52803 228 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 SP4Q02446 784 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 STRN3Q13033 797 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 BMS1Q14692 1282 aaKnown RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 KIF22Q14807 665 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 DRAP1Q14919 205 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 CCL15Q16663 113 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 LY6KQ17RY6 165 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TDRD12Q587J7 1177 aaKnown RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 KRT39Q6A163 491 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 PHLDB3Q6NSJ2 640 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 MAMDC4Q6UXC1 1216 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ZPBP2Q6X784 338 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ZNF571Q7Z3V5 609 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 GPD1LQ8N335 351 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 SLC30A5Q8TAD4 765 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 PARD3BQ8TEW8 1205 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TCP11Q8WWU5 503 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 PSPC1Q8WXF1 523 aaKnown RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 BRI3BPQ8WY22 251 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ACDQ96AP0 544 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 RPGRIP1Q96KN7 1286 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 FAM81BQ96LP2 452 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 SYT11Q9BT88 431 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 GPR88Q9GZN0 384 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 SMARCAD1Q9H4L7 1026 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 PCIF1Q9H4Z3 704 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 TMEM8AQ9HCN3 771 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
ATXN3-235ENST00000556082 SAR1BQ9Y6B6 198 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 ADGRA3Q8IWK6 1321 aa8.98□□□□□ -0.97
ATXN3-235ENST00000556082 A0A0A6YYK5 440 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ZNF233A6NK53 670 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ZBTB42B2RXF5 422 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 K7ERI5 159 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 OIP5O43482 229 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 RRP9O43818 475 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 HBP1O60381 514 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ZC3H11AO75152 810 aaKnown RBP eCLIP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 LDHAP00338 332 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ADRB2P07550 413 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 TXNP10599 105 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 H2AFXP16104 143 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 SOX10P56693 466 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 DLG4P78352 724 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 POU5F1BQ06416 359 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 CYP24A1Q07973 514 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 MXD4Q14582 209 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ERCC6LQ2NKX8 1250 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 TAPT1Q6NXT6 567 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 CBWD2Q8IUF1 395 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 DHX37Q8IY37 1157 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 MSL3Q8N5Y2 521 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 C1orf216Q8TAB5 229 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 DEPTORQ8TB45 409 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 PLEKHO2Q8TD55 490 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ASAP3Q8TDY4 903 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 UBE2Q2Q8WVN8 375 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 POMGNT1Q8WZA1 660 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 TMEM143Q96AN5 459 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 CALR3Q96L12 384 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 SPATA33Q96N06 139 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ALS2CR12Q96Q35 445 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 PARK7Q99497 189 aaKnown RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 KIFC3Q9BVG8 833 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 TMEM117Q9H0C3 514 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 PDCL3Q9H2J4 239 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 ADAMTS1Q9UHI8 967 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 NAGPAQ9UK23 515 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 AJAP1Q9UKB5 411 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-235ENST00000556082 DUSP10Q9Y6W6 482 aa8.97□□□□□ -0.97
ATXN3-235ENST00000556082 KIAA1217Q5T5P2 1943 aa8.96□□□□□ -0.97
ATXN3-235ENST00000556082 A0A0B4J269 797 aa8.96□□□□□ -0.98
ATXN3-235ENST00000556082 MACROD2A1Z1Q3 448 aa8.96□□□□□ -0.98
ATXN3-235ENST00000556082 HNRNPDLO14979 420 aaKnown RBP8.96□□□□□ -0.98
ATXN3-235ENST00000556082 ASAP2O43150 1006 aa8.96□□□□□ -0.98
ATXN3-235ENST00000556082 PPFIA4O75335 1185 aa8.96□□□□□ -0.98
ATXN3-235ENST00000556082 ADORA2AP29274 412 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms