RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CLCNKBP51801 687 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 SLC12A3P55017 1021 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 STRN3Q13033 797 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 TMEM119Q4V9L6 283 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 MPZL3Q6UWV2 235 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 ZPBP2Q6X784 338 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 SPATA31D4Q6ZUB0 917 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 ANKS3Q6ZW76 656 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 TMEM161BQ8NDZ6 487 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 SNX27Q96L92 541 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 TBC1D32Q96NH3 1257 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 TARS2Q9BW92 718 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 SMOC2Q9H3U7 446 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 WNT16Q9UBV4 365 aa13.92□□□□□ -0.18
HNRNPC-221ENST00000555883 MYO15AQ9UKN7 3530 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 VWA3AA6NCI4 1184 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 ANHXE9PGG2 379 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 XYLBO75191 536 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 C8AP07357 584 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 GLRA4Q5JXX5 417 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 CD300LGQ6UXG3 332 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 GLYCTKQ8IVS8 523 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 TMEM105Q8N8V8 129 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 CEP120Q8N960 986 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 ACAP3Q96P50 834 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 MYADMQ96S97 322 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 MFSD1Q9H3U5 465 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 SMC3Q9UQE7 1217 aa13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 MTCL1Q9Y4B5 1905 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-221ENST00000555883 SYN3O14994 580 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 SLC16A4O15374 487 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 SRFP11831 508 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 AOC1P19801 751 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 ABCD1P33897 745 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 NCKAP1LP55160 1127 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 MCL1Q07820 350 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 NOLC1Q14978 699 aaKnown RBP eCLIP13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 PPM1LQ5SGD2 360 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 SLC8B1Q6J4K2 584 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 SLC44A3Q8N4M1 653 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 CDK5RAP3Q96JB5 506 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 RTP3Q9BQQ7 232 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
HNRNPC-221ENST00000555883 PROB1E7EW31 1015 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 PODXLO00592 558 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 ADAM12O43184 909 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 NPR3P17342 541 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 FSHRP23945 695 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 OR1D2P34982 312 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 HTR4Q13639 388 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 KYAT1Q16773 422 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 AXDND1Q5T1B0 1012 aaPredicted RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 ZMAT2Q96NC0 199 aaKnown RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 TSPAN18Q96SJ8 248 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 PLEKHA5Q9HAU0 1116 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 GOLGA2P5Q9HBQ8 144 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 AVENQ9NQS1 362 aaPredicted RBP13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 SLC2A4RGQ9NR83 387 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 CDH7Q9ULB5 785 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 MAFFQ9ULX9 164 aa13.89□□□□□ -0.19
HNRNPC-221ENST00000555883 MYO10Q9HD67 2058 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 SFI1A8K8P3 1242 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 CLDN3O15551 220 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 TBC1D4O60343 1298 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 PIGRP01833 764 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 ZNF131P52739 623 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 CUL4AQ13619 759 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 MRPL58Q14197 206 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 GET4Q7L5D6 327 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 GRASPQ7Z6J2 395 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 SIX5Q8N196 739 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 ZNF461Q8TAF7 563 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 SLC7A14Q8TBB6 771 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 FBXL21Q9UKT6 434 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 CDY1Q9Y6F8 540 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
HNRNPC-221ENST00000555883 DMDP11532 3685 aa13.87□□□□□ -0.19
HNRNPC-221ENST00000555883 ARHGEF37A1IGU5 675 aa13.87□□□□□ -0.19
HNRNPC-221ENST00000555883 H7C4K7 107 aa13.87□□□□□ -0.19
HNRNPC-221ENST00000555883 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-221ENST00000555883 ABLIM3O94929 683 aa13.87□□□□□ -0.19
HNRNPC-221ENST00000555883 CLTAP09496 248 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms