RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 DDR2Q16832 855 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF568Q3ZCX4 644 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 CD276Q5ZPR3 534 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 LDHAL6AQ6ZMR3 332 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 Q7L0L9 218 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 FAM84BQ96KN1 310 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-233ENST00000555816 STK31Q9BXU1 1019 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 OSBPL2Q9H1P3 480 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 SLITRK6Q9H5Y7 841 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 PIF1Q9H611 641 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 MYH16Q9H6N6 1097 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 SLPIP03973 132 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 GYG1P46976 350 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 CACNB3P54284 484 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 MOGSQ13724 837 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 CCDC57Q2TAC2 916 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 KCTD1Q719H9 257 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 FASTKD5Q7L8L6 764 aaKnown RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 PALM2Q8IXS6 379 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 CELF2-AS1Q8N7Q2 184 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 STPG3Q8N7X2 389 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 LINS1Q8NG48 757 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 ALG1Q9BT22 464 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 PCED1AQ9H1Q7 454 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 RBPJLQ9UBG7 517 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF112Q9UJU3 913 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-233ENST00000555816 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-233ENST00000555816 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-233ENST00000555816 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-233ENST00000555816 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
ATXN3-233ENST00000555816 COL6A2P12110 1019 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 SPDYAQ5MJ70 313 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 TCTN3Q6NUS6 607 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 G2E3Q7L622 706 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 FAM151AQ8WW52 585 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 COA7Q96BR5 231 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 PPARGC1AQ9UBK2 798 aaKnown RBP6.08□□□□□ -1.44
ATXN3-233ENST00000555816 ZFR2Q9UPR6 939 aaKnown RBP6.08□□□□□ -1.44
ATXN3-233ENST00000555816 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
ATXN3-233ENST00000555816 CENPFP49454 3210 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 TRAV20A0A0B4J274 112 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 APAF1O14727 1248 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 PRODHO43272 600 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 FRAT2O75474 233 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 SOD2P04179 222 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 NAT1P18440 290 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 GLRBP48167 497 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 RAC3P60763 192 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 IFRD2Q12894 506 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 FOXE3Q13461 319 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 ZMAT1Q5H9K5 638 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 CXXC5Q7LFL8 322 aaKnown RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 ZFPM1Q8IX07 1006 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 OSBP2Q969R2 916 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-233ENST00000555816 KCNJ15Q99712 375 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.441e-11■■■■□ 25.2
ATXN3-233ENST00000555816 C11orf49Q9H6J7 331 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 ST7Q9NRC1 585 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 SIRPGQ9P1W8 387 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 FBXO10Q9UK96 956 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 ZHX2Q9Y6X8 837 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 CEP290O15078 2479 aa6.07□□□□□ -1.44
ATXN3-233ENST00000555816 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 WNT9AO14904 365 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 FOXS1O43638 330 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 COMTP21964 271 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 DBPQ10586 325 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 TWISTNBQ3B726 338 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 MIIPQ5JXC2 388 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 KCNT2Q6UVM3 1135 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 NOP9Q86U38 636 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms