RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 HECTD2Q5U5R9 776 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 C1QL3Q5VWW1 255 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 KCNV1Q6PIU1 500 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 LMBR1LQ6UX01 489 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 BMP8AQ7Z5Y6 402 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 GLB1L2Q8IW92 636 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 CAMKK1Q8N5S9 505 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 NRG4Q8WWG1 115 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 DYDC2Q96IM9 177 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 TAAR9Q96RI9 348 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 IL23AQ9NPF7 189 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 DDX20Q9UHI6 824 aaKnown RBP6.82□□□□□ -1.32
VRK1-205ENST00000555402 INTUQ9ULD6 942 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 INO80B-WBP1J3KQ70 363 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 PPFIA4O75335 1185 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 MYBP10242 640 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 GSPT1P15170 499 aaKnown RBP6.81□□□□□ -1.32
VRK1-205ENST00000555402 RHBDL3P58872 404 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 MGAT5Q09328 741 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 GBX1Q14549 363 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 ATAT1Q5SQI0 421 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 B3GNT9Q6UX72 402 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 BTNL9Q6UXG8 535 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 LRRC55Q6ZSA7 311 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 USP45Q70EL2 814 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 GLB1L3Q8NCI6 653 aaPredicted RBP6.81□□□□□ -1.32
VRK1-205ENST00000555402 HPS3Q969F9 1004 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 RUNDC1Q96C34 613 aa6.81□□□□□ -1.32
VRK1-205ENST00000555402 INO80BQ9C086 356 aaPredicted RBP6.81□□□□□ -1.32
VRK1-205ENST00000555402 POLR3BQ9NW08 1133 aaPredicted RBP6.81□□□□□ -1.32
VRK1-205ENST00000555402 A0A0A6YYK5 440 aaPredicted RBP6.8□□□□□ -1.32
VRK1-205ENST00000555402 CCDC154A6NI56 674 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 KIAA0355O15063 1070 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 NBPF7P0C2Y1 421 aaPredicted RBP6.8□□□□□ -1.32
VRK1-205ENST00000555402 ANTXR2P58335 489 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 KRTAP10-9P60411 292 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 BIRC2Q13490 618 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 UBE4AQ14139 1066 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 BRD3Q15059 726 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 SYCP2LQ5T4T6 812 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 MFSD5Q6N075 450 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 FAM180AQ6UWF9 173 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 DIS3LQ8TF46 1054 aaKnown RBP6.8□□□□□ -1.32
VRK1-205ENST00000555402 MVB12AQ96EY5 273 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 ACO2Q99798 780 aaKnown RBP6.8□□□□□ -1.32
VRK1-205ENST00000555402 GREM2Q9H772 168 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 DMRT3Q9NQL9 472 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 MAN1C1Q9NR34 630 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.8□□□□□ -1.32
VRK1-205ENST00000555402 DNAI1Q9UI46 699 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 LIMCH1Q9UPQ0 1083 aa6.8□□□□□ -1.32
VRK1-205ENST00000555402 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
VRK1-205ENST00000555402 NOMO1Q15155 1222 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 PGS1Q32NB8 556 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 NAIF1Q69YI7 327 aaPredicted RBP6.79□□□□□ -1.32
VRK1-205ENST00000555402 MB21D1Q8N884 522 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 ZBTB34Q8NCN2 500 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 BEND2Q8NDZ0 799 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 MDGA1Q8NFP4 955 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 DPF2Q92785 391 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 TTC17Q96AE7 1141 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
VRK1-205ENST00000555402 SARGQ9BW04 601 aa6.79□□□□□ -1.32
VRK1-205ENST00000555402 HTRA2O43464 458 aaPredicted RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 ERBB2P04626 1255 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 MCAMP43121 646 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 CLK3P49761 638 aaKnown RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 FXR1P51114 621 aaKnown RBP eCLIP6.78□□□□□ -1.32
VRK1-205ENST00000555402 MAN2A1Q16706 1144 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 COBLL1Q53SF7 1204 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 MIGA2Q7L4E1 593 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 PMM1Q92871 262 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 HDAC10Q969S8 669 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 C1GALT1C1Q96EU7 318 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 ZNF512Q96ME7 567 aaPredicted RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 WDR92Q96MX6 357 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 FAM193BQ96PV7 902 aaPredicted RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 RPS6KC1Q96S38 1066 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 MPHOSPH6Q99547 160 aaKnown RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 FDXACB1Q9BRP7 624 aaPredicted RBP6.78□□□□□ -1.32
VRK1-205ENST00000555402 FAM204AQ9H8W3 233 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 SORCS3Q9UPU3 1222 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 FAM50BQ9Y247 325 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 COX11Q9Y6N1 276 aa6.78□□□□□ -1.32
VRK1-205ENST00000555402 AKR1B10O60218 316 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 IPO13O94829 963 aaKnown RBP6.77□□□□□ -1.33
VRK1-205ENST00000555402 SEC24DO94855 1032 aaPredicted RBP6.77□□□□□ -1.33
VRK1-205ENST00000555402 FSBPO95073 299 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 TRIM27P14373 513 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 TAP1Q03518 808 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 LLGL1Q15334 1064 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 C3orf36Q3SXR2 165 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 TIGD2Q4W5G0 525 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 PRR18Q8N4B5 295 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 PLA2G15Q8NCC3 412 aa6.77□□□□□ -1.33
VRK1-205ENST00000555402 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms