RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 SYCE2Q6PIF2 218 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 MAP4K3Q8IVH8 894 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GRAMD1CQ8IYS0 662 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 C12orf76Q8N812 135 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 FEZF2Q8TBJ5 459 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SLC22A17Q8WUG5 538 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SNX27Q96L92 541 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 S1PR5Q9H228 398 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ST6GALNAC4Q9H4F1 302 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 KCNH3Q9ULD8 1083 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 HCFC2Q9Y5Z7 792 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TTC28Q96AY4 2481 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ZMYM2Q9UBW7 1377 aa13.56□□□□□ -0.24
TRAPPC6B-205ENST00000555269 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 FAM189A1O60320 539 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PPP1R37O75864 691 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PRPF6O94906 941 aaKnown RBP13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GCNT3O95395 438 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CXCL8P10145 99 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 KCNE1P15382 129 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 AFMP43652 599 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 KRT85P78386 507 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 DSG1Q02413 1049 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 COASYQ13057 564 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PUS10Q3MIT2 529 aaKnown RBP13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 DCLRE1AQ6PJP8 1040 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 RIN2Q8WYP3 895 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 MSTO1Q9BUK6 570 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SERTAD1Q9UHV2 236 aa13.55□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TTC26A0AVF1 554 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 I3L4J1 428 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TNFRSF10AO00220 468 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 OGTO15294 1046 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TEX28O15482 410 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 B3GAT3O94766 335 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 URODP06132 367 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CMA1P23946 247 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ADSSP30520 456 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 BRCC3P46736 316 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GLUD2P49448 558 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ACOT2P49753 483 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ASIC1P78348 528 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SMAD4Q13485 552 aaKnown RBP13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SMAD2Q15796 467 aaKnown RBP13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 UPP1Q16831 310 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ADALQ6DHV7 355 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GLYCTKQ8IVS8 523 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 ACCSQ96QU6 501 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 EMILIN2Q9BXX0 1053 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 STK39Q9UEW8 545 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CUL9Q8IWT3 2517 aa13.54□□□□□ -0.24
TRAPPC6B-205ENST00000555269 MYH11P35749 1972 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 PFKFB1P16118 471 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SCP2P22307 547 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CLCN4P51793 760 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 GUCY2FP51841 1108 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 AMPD3Q01432 767 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CUL4BQ13620 913 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 RTP2Q5QGT7 225 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 CASP10Q92851 521 aa13.53□□□□□ -0.24
TRAPPC6B-205ENST00000555269 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms