RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
TMEM260-206ENST00000555046 SSX2IPQ9Y2D8 614 aa11.54□□□□□ -0.56
TMEM260-206ENST00000555046 KMT2EQ8IZD2 1858 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 WDR81Q562E7 1941 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 MEIS3P2A8K0S8 358 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 ABLIM1O14639 778 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 KLRC4O43908 158 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 IL18RAPO95256 599 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 LINC00271P0C7V0 271 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 HARSP12081 509 aaKnown RBP11.53□□□□□ -0.56
TMEM260-206ENST00000555046 RPL9P32969 192 aaKnown RBP11.53□□□□□ -0.56
TMEM260-206ENST00000555046 SCNN1GP51170 649 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 STIM1Q13586 685 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 MYBPC2Q14324 1141 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 SURF1Q15526 300 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 BMT2Q1RMZ1 405 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 ARMCX5Q6P1M9 558 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 COLGALT2Q8IYK4 626 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 SPPL3Q8TCT6 385 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 ZFP42Q96MM3 310 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 NGRNQ9NPE2 291 aaKnown RBP11.53□□□□□ -0.56
TMEM260-206ENST00000555046 COG5Q9UP83 839 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 DERAQ9Y315 318 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 USP24Q9UPU5 2620 aa11.53□□□□□ -0.56
TMEM260-206ENST00000555046 ZNF233A6NK53 670 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 ANKRD63C9JTQ0 380 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 PDXKO00764 312 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 NRP1O14786 923 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 EXTL3O43909 919 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 TADA2AO75478 443 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 DDHD2O94830 711 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 ARHGEF15O94989 841 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 EDN1P05305 212 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 ITGB1P05556 798 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CYP3A5P20815 502 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 RPL13P26373 211 aaKnown RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CASP1P29466 404 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 OR1G1P47890 313 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CASP5P51878 434 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 DSC1Q08554 894 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 KCNA1Q09470 495 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 ELAVL2Q12926 359 aaKnown RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 STK4Q13043 487 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 TIGD5Q53EQ6 642 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 NT5DC4Q86YG4 428 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 ZNF280BQ86YH2 543 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 SLC39A11Q8N1S5 342 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 GSTCDQ8NEC7 633 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CACTINQ8WUQ7 758 aaKnown RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 IGSF21Q96ID5 467 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 MIOSQ9NXC5 875 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CNTN3Q9P232 1028 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 PCDHA5Q9Y5H7 936 aa11.52□□□□□ -0.57
TMEM260-206ENST00000555046 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-206ENST00000555046 LOXHD1Q8IVV2 1947 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 TTC26A0AVF1 554 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 ADRB2P07550 413 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 ADSSP30520 456 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 SLC11A1P49279 550 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 PNOCQ13519 176 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 ZNF658Q5TYW1 1059 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 USP37Q86T82 979 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 C12orf56Q8IXR9 622 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 GUF1Q8N442 669 aaKnown RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 BEST2Q8NFU1 509 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 TMEM174Q8WUU8 243 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 HPS3Q969F9 1004 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 PPP1R10Q96QC0 940 aaKnown RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 TLR9Q9NR96 1032 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 AGPAT3Q9NRZ7 376 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 R3HCC1Q9Y3T6 440 aaKnown RBP11.51□□□□□ -0.57
TMEM260-206ENST00000555046 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
TMEM260-206ENST00000555046 COL4A6Q14031 1691 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 ZNF292O60281 2723 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 LACTBL1A8MY62 500 aa11.5□□□□□ -0.57
TMEM260-206ENST00000555046 RFXAPO00287 272 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms