RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 ZBTB5O15062 677 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 NPEPPSP55786 919 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 MOGSQ13724 837 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 BTG3Q14201 252 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 OLFML2BQ68BL8 750 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 STMN2Q93045 179 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 FOXN2P32314 431 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 RPL21P46778 160 aaKnown RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 PSMC6P62333 389 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 EXOC3L4Q17RC7 722 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 NCCRP1Q6ZVX7 275 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 TRMT10CQ7L0Y3 403 aaKnown RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 RIBC1Q8N443 379 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-203ENST00000554873 MPP4Q96JB8 637 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 MIPEPQ99797 713 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 PRDM16Q9HAZ2 1276 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 SAR1AQ9NR31 198 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 SPATA7Q9P0W8 599 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
SYNE3-203ENST00000554873 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.26
SYNE3-203ENST00000554873 A6NJR5 290 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 SERPINB3P29508 390 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 COPB2P35606 906 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 IL9RQ01113 521 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC92Q53HC0 331 aaPredicted RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 DYDC2Q96IM9 177 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 CADM1Q9BY67 442 aaKnown RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 ERVK-5Q9HDB9 667 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 SUN2Q9UH99 717 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 AJAP1Q9UKB5 411 aaPredicted RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 NRAPQ86VF7 1730 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 PODXLO00592 558 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 IDO1P14902 403 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 NEK3P51956 506 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 CLUL1Q15846 466 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 ABTB1Q969K4 478 aaPredicted RBP16.64■□□□□ 0.25
SYNE3-203ENST00000554873 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 SMC6Q96SB8 1091 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 NENFQ9UMX5 172 aa16.64■□□□□ 0.25
SYNE3-203ENST00000554873 SMIM31A0A1B0GVY4 71 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 MAGEB2O15479 319 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 SUPT3HO75486 399 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 PRKCIP41743 596 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 PTGIRP43119 386 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 EPHA7Q15375 998 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 DUS1LQ6P1R4 473 aaKnown RBP16.63■□□□□ 0.25
SYNE3-203ENST00000554873 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 DTX3LQ8TDB6 740 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 NHSQ6T4R5 1651 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 AKAP3O75969 853 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 FAM98CQ17RN3 349 aaKnown RBP16.63■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC174Q6PII3 467 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 ADAT2Q7Z6V5 191 aaKnown RBP16.63■□□□□ 0.25
SYNE3-203ENST00000554873 CORO1BQ9BR76 489 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 DDX4Q9NQI0 724 aaKnown RBP16.63■□□□□ 0.25
SYNE3-203ENST00000554873 PTTG2Q9NZH5 202 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 NDUFA13Q9P0J0 144 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 PHTF1Q9UMS5 762 aa16.63■□□□□ 0.25
SYNE3-203ENST00000554873 MEIS1O00470 390 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 TPD52L2O43399 206 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 XRCC5P13010 732 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ADARP55265 1226 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 TAF1BQ53T94 588 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 DCAF17Q5H9S7 520 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 GJB7Q6PEY0 223 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 TSHZ1Q6ZSZ6 1077 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 SIX2Q9NPC8 291 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 DDX3YO15523 660 aaKnown RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC22O60826 627 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 RFC4P35249 363 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 RGS2P41220 211 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 DSG1Q02413 1049 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 USH1GQ495M9 461 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 CFAP157Q5JU67 520 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 CCDC80Q76M96 950 aa16.62■□□□□ 0.25
SYNE3-203ENST00000554873 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-203ENST00000554873 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms