RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UHRF1Q96T88 793 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 C7orf25Q9BPX7 421 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 DDX20Q9UHI6 824 aaKnown RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 AJAP1Q9UKB5 411 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 GOLGA6CA6NDK9 693 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GOLGA6BA6NDN3 693 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 CXorf49A8MYA2 514 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 KIF3BO15066 747 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SGTAO43765 313 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 FAM20BO75063 409 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GPR32O75388 356 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GOLGA6DP0CG33 693 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 LPOP22079 712 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 ALDH1A3P47895 512 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 ABHD18Q0P651 414 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 TARDBPQ13148 414 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 IL10RAQ13651 578 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GFOD2Q3B7J2 385 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 UAP1L1Q3KQV9 507 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 ARHGAP29Q52LW3 1261 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 AFMIDQ63HM1 303 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SYT12Q8IV01 421 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 RHOT1Q8IXI2 618 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 OR10H5Q8NGA6 315 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 CCHCR1Q8TD31 782 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF483Q8TF39 744 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SLC25A43Q8WUT9 341 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 RAB24Q969Q5 203 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 CAMKK2Q96RR4 588 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 NUP88Q99567 741 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 CHMP4AQ9BY43 222 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SENP6Q9GZR1 1112 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SLC12A5Q9H2X9 1139 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 MANSC1Q9H8J5 431 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SPON1Q9HCB6 807 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GEMIN8Q9NWZ8 242 aaKnown RBP4.02□□□□□ -1.77
SCFD1-213ENST00000554776 OBP2AQ9NY56 170 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GOLGA6AQ9NYA3 693 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 GPRC5BQ9NZH0 403 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SRRDQ9UH36 339 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 SORCS3Q9UPU3 1222 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 HS3ST3A1Q9Y663 406 aa4.02□□□□□ -1.77
SCFD1-213ENST00000554776 PNPLA7Q6ZV29 1317 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 AHRRA9YTQ3 701 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 LEFTY2O00292 366 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 RECQL4O94761 1208 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 SNRPA1P09661 255 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 IL2RBP14784 551 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MAKP20794 623 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 NR4A1P22736 598 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MGAT1P26572 445 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 APOBEC3AP31941 199 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CYP2C19P33261 490 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MCM7P33993 719 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PTTG1IPP53801 180 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CDC42EP1Q00587 391 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 DSC2Q02487 901 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 GRM3Q14832 879 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MINDY4Q4G0A6 757 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 RRP12Q5JTH9 1297 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 IFIT1BQ5T764 474 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 OTUD7BQ6GQQ9 843 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CXorf57Q6NSI4 855 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 EFCAB12Q6NXP0 572 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 RHOUQ7L0Q8 258 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MIER2Q8N344 545 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PRR18Q8N4B5 295 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF276Q8N554 614 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 ZFP28Q8NHY6 868 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 IFI44Q8TCB0 444 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CPT1CQ8TCG5 803 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 NSUN6Q8TEA1 469 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 STON2Q8WXE9 905 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 TFAP2CQ92754 450 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 KAT5Q92993 513 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 DCLRE1CQ96SD1 692 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PCED1AQ9H1Q7 454 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MMRN2Q9H8L6 949 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 SLC2A4RGQ9NR83 387 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 TMEM140Q9NV12 185 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 MOCS1Q9NZB8 636 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 SLC23A1Q9UHI7 598 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 EIF2B4Q9UI10 523 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PNMA8BQ9ULN7 279 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CHST2Q9Y4C5 530 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PCDHB1Q9Y5F3 818 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 PCDHA13Q9Y5I0 950 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 ACTL7AQ9Y615 435 aa4.01□□□□□ -1.77
SCFD1-213ENST00000554776 CFAP20Q9Y6A4 193 aaKnown RBP4.01□□□□□ -1.77
SCFD1-213ENST00000554776 ARID4BQ4LE39 1312 aaPredicted RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 MYBBP1AQ9BQG0 1328 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 DIRC3C9JPN6 131 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 SCAF4O95104 1147 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 SLPIP03973 132 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 KRT18P05783 430 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 POU2F2P09086 479 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 DDCP20711 480 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 AKAP5P24588 427 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms