RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 TMEM173Q86WV6 379 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 NOC3LQ8WTT2 800 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 C18orf25Q96B23 403 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 FAM212AQ96EL1 285 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 KIF12Q96FN5 646 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 FAN1Q9Y2M0 1017 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 C2CD2Q9Y426 696 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 TRANK1O15050 2925 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 RALGAPA2Q2PPJ7 1873 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 NT5C1B-RDH14C9J2C7 533 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 NFICP08651 508 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 CCNE1P24864 410 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 OR1G1P47890 313 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 PMS1P54277 932 aaKnown RBP23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 PLCB3Q01970 1234 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 LRRC63Q05C16 580 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 GPM6BQ13491 265 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 KLHL40Q2TBA0 621 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 JADE1Q6IE81 842 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 GDPD5Q8WTR4 605 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 BCL7CQ8WUZ0 217 aaPredicted RBP23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 IGSF21Q96ID5 467 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 UROC1Q96N76 676 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 PAAF1Q9BRP4 392 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 MTMR10Q9NXD2 777 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 TMEM63CQ9P1W3 806 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 CACNG4Q9UBN1 327 aa23.27■■□□□ 1.31
SDR39U1-208ENST00000554698 KIAA1671Q9BY89 1806 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 CASTOR2A6NHX0 329 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 RFXAPO00287 272 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 CYP3A5P20815 502 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 NR2F2P24468 414 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 RPL13P26373 211 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 TMEM132DQ14C87 1099 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 ANKRD40Q6AI12 368 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 FOXR2Q6PJQ5 311 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 MLKLQ8NB16 471 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 RDH13Q8NBN7 331 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 MFSD14AQ96MC6 490 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 GOLGA2P5Q9HBQ8 144 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 PDE11AQ9HCR9 933 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 MARCH5Q9NX47 278 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 TUBGCP4Q9UGJ1 667 aa23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 UBQLN1Q9UMX0 589 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 PRG3Q9Y2Y8 225 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-208ENST00000554698 GRM6O15303 877 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 CYP24A1Q07973 514 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 UPP1Q16831 310 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 SPATA1Q5VX52 437 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 NT5DC4Q86YG4 428 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 ZC3H3Q8IXZ2 948 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 EFCAB13Q8IY85 973 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 SPPL3Q8TCT6 385 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 DDX27Q96GQ7 796 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 GUCD1Q96NT3 240 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 TSG101Q99816 390 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 COLEC11Q9BWP8 271 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 ALG13Q9NP73 1137 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 LZTS1Q9Y250 596 aa23.25■■□□□ 1.31
SDR39U1-208ENST00000554698 CDH23Q9H251 3354 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 TRIM49BA6NDI0 452 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 F8W810 466 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 MAPK13O15264 365 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 XPOTO43592 962 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 RPL9P32969 192 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 CASP4P49662 377 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 KRT17Q04695 432 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 UBE3AQ05086 875 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 ADAM9Q13443 819 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 PSMD6Q15008 389 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 SURF1Q15526 300 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 KLHL10Q6JEL2 608 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 NELFBQ8WX92 580 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 TMEM169Q96HH4 297 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 CDX2Q99626 313 aaPredicted RBP23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 NLRC5Q86WI3 1866 aa23.24■■□□□ 1.31
SDR39U1-208ENST00000554698 CITO14578 2027 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 AKAP3O75969 853 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 EFEMP2O95967 443 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 LRPAP1P30533 357 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 CLCNKBP51801 687 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 NLRP12P59046 1061 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 PAK1Q13153 545 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 DPCR1Q3MIW9 517 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 CEP135Q66GS9 1140 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 TTI2Q6NXR4 508 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 CAVIN1Q6NZI2 390 aaKnown RBP23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 LMAN2LQ9H0V9 348 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 GZF1Q9H116 711 aaPredicted RBP23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 CTNND2Q9UQB3 1225 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 FRMD4BQ9Y2L6 1034 aa23.23■■□□□ 1.31
SDR39U1-208ENST00000554698 TMEM189-UBE2V1I3L0A0 370 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 KIF4AO95239 1232 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 POU3F3P20264 500 aaPredicted RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 DNAJB1P25685 340 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 FKBP3Q00688 224 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 CAMK1Q14012 370 aa23.22■■□□□ 1.31
SDR39U1-208ENST00000554698 ADGRE1Q14246 886 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms