RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 LGALS16A8MUM7 142 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 B4DLN1 442 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 GIPC1O14908 333 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 MAFGO15525 162 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 B4GALT5O43286 388 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 STRNO43815 780 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ADAMTS4O75173 837 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 MAFO75444 373 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 GNRH1P01148 92 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 EPXP11678 715 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ACTN1P12814 892 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 PLS3P13797 630 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 IBSPP21815 317 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 IGFBP6P24592 240 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 YY1P25490 414 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 MAPK4P31152 587 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 SFNP31947 248 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 GATA4P43694 442 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 FLT3LGP49771 235 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 CLCN3P51790 818 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 PEX3P56589 373 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 NKX3-2P78367 333 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 PPP3CAQ08209 521 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 CACNB2Q08289 660 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 CCDC173Q0VFZ6 552 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 TCTN1Q2MV58 587 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 DEFB115Q30KQ5 88 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 XKR3Q5GH77 459 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 HERC4Q5GLZ8 1057 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 L1TD1Q5T7N2 865 aaKnown RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM214Q6NUQ4 689 aaKnown RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 GJB7Q6PEY0 223 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 FOXR2Q6PJQ5 311 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 SMAP1Q8IYB5 467 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF295-AS1Q8N0V1 137 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 DNAJC5GQ8N7S2 189 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ATP8B4Q8TF62 1192 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 SLC35C1Q96A29 364 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 VWCEQ96DN2 955 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 SPATA33Q96N06 139 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 APBA2Q99767 749 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 NTPCRQ9BSD7 190 aaKnown RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 GPR88Q9GZN0 384 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 UPF3AQ9H1J1 476 aaKnown RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 VPS16Q9H269 839 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ST6GALNAC4Q9H4F1 302 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 EHMT1Q9H9B1 1298 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF302Q9NR11 478 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 AGPAT3Q9NRZ7 376 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 TFR2Q9UP52 801 aa6.42□□□□□ -1.38
ATXN3-230ENST00000554673 CTDP1Q9Y5B0 961 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF638Q14966 1978 aaKnown RBP6.42□□□□□ -1.38
ATXN3-230ENST00000554673 KIAA1671Q9BY89 1806 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 LOC102724159A0A0B4J2E5 919 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ARHGEF35A5YM69 484 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 GOLGA8IPA6NC78 632 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 GOLGA8JA6NMD2 632 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ZNF263O14978 683 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 BNIP3LO60238 219 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 MSCO60682 206 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 TRPA1O75762 1119 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 F2P00734 622 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CALCAP01258 141 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 NR3C1P04150 777 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PSAPP07602 524 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PLEKP08567 350 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PNMA6AP0CW24 399 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 TGFB3P10600 412 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 INSRRP14616 1297 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 COPB2P35606 906 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PSMC4P43686 418 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 DGKGP49619 791 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 STAT5BP51692 787 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 ADKP55263 362 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 UBAP2LQ14157 1087 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 GPNMBQ14956 572 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PWP2Q15269 919 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 KNOP1Q1ED39 458 aaKnown RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 C11orf91Q3C1V1 193 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CBWD6Q4V339 395 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 PLEKHG4Q58EX7 1191 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CBWD3Q5JTY5 395 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 GNASQ5JWF2 1037 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CBWD5Q5RIA9 395 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CCDC181Q5TID7 509 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 RAD9BQ6WBX8 426 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 TMC6Q7Z403 805 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 HAUS6Q7Z4H7 955 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CBWD2Q8IUF1 395 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 MAP4K3Q8IVH8 894 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 MYOCDQ8IZQ8 938 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 CEP120Q8N960 986 aa6.41□□□□□ -1.38
ATXN3-230ENST00000554673 RASSF8Q8NHQ8 419 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms