RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 OR14A2Q96R54 314 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 SH3GL3Q99963 347 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 PLA2G12BQ9BX93 195 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 RSPH9Q9H1X1 276 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 GNL3LQ9NVN8 582 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 SRPK3Q9UPE1 567 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 NR2E1Q9Y466 385 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 CTDP1Q9Y5B0 961 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 NRXN2Q9P2S2 1712 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 ARFGEF2Q9Y6D5 1785 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 TTC21AQ8NDW8 1320 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 COL11A2P13942 1736 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC194A0A1B0GVG4 234 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 RASSF10A6NK89 507 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 WDHD1O75717 1129 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 REC8O95072 547 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 AMY2AP04746 511 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 C1SP09871 688 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 TNNT1P13805 278 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 AMY2BP19961 511 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 KCNA3P22001 575 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ALDH1B1P30837 517 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ADCY8P40145 1251 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ETV4P43268 484 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 KCNQ1P51787 676 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 SOX10P56693 466 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 PTH1RQ03431 593 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 PAK1Q13153 545 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 RABEP1Q15276 862 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC30Q5VVM6 783 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 OSTM1Q86WC4 334 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 EFCAB13Q8IY85 973 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 RPUSD2Q8IZ73 545 aaKnown RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ST13P5Q8NFI4 369 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 IL17DQ8TAD2 202 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 RSPH1Q8WYR4 309 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 GCC1Q96CN9 775 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ZDHHC5Q9C0B5 715 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 C12orf65Q9H3J6 166 aaKnown RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 RWDD1Q9H446 243 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 CPSF2Q9P2I0 782 aaKnown RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 ARHGAP28Q9P2N2 729 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 NRBP1Q9UHY1 535 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 NOL7Q9UMY1 257 aaKnown RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 SLC30A1Q9Y6M5 507 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 CUL9Q8IWT3 2517 aa5.04□□□□□ -1.6
ATXN3-227ENST00000554491 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
ATXN3-227ENST00000554491 TTC21BQ7Z4L5 1316 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 WDR33Q9C0J8 1336 aaKnown RBP5.03□□□□□ -1.6
ATXN3-227ENST00000554491 SHTN1A0MZ66 631 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 ERICH4A6NGS2 130 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 KCNK3O14649 394 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PDE6AP16499 860 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 VCAM1P19320 739 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 MC4RP32245 332 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 SESN3P58005 492 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 ICA1Q05084 483 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 ABHD18Q0P651 414 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PDIA5Q14554 519 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 GPR19Q15760 415 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 SLC5A9Q2M3M2 681 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 LSM12Q3MHD2 195 aaKnown RBP5.03□□□□□ -1.6
ATXN3-227ENST00000554491 ZMAT1Q5H9K5 638 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 TTLL5Q6EMB2 1281 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 MAMDC4Q6UXC1 1216 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 DPP8Q6V1X1 898 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-227ENST00000554491 POLNQ7Z5Q5 900 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 ZNF808Q8N4W9 903 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-227ENST00000554491 MIGA1Q8NAN2 632 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PCDH19Q8TAB3 1148 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CFHR4Q92496 578 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PMM1Q92871 262 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CHFRQ96EP1 664 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 SEZ6LQ9BYH1 1024 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-227ENST00000554491 TRPV5Q9NQA5 729 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CATSPERZQ9NTU4 200 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CDC42EP3Q9UKI2 254 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 BLOC1S6Q9UL45 172 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 CBLCQ9ULV8 474 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 PCDHA8Q9Y5H6 950 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 SCN11AQ9UI33 1791 aa5.03□□□□□ -1.6
ATXN3-227ENST00000554491 BCORQ6W2J9 1755 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 U2SURPO15042 1029 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 HMGCRP04035 888 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 MYBL2P10244 700 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 PYGMP11217 842 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 KRT15P19012 456 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 PTGS1P23219 599 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 ATICP31939 592 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 STIP1P31948 543 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 JAM2P57087 298 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 SYCP1Q15431 976 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 TAF7Q15545 349 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC178Q5BJE1 867 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 SPATC1Q76KD6 591 aa5.02□□□□□ -1.61
ATXN3-227ENST00000554491 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
ATXN3-227ENST00000554491 C1orf210Q8IVY1 113 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms