RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 PHKA1P46020 1223 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CTXN1P60606 82 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 DUSP8Q13202 625 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 RAB39AQ14964 217 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 FAM47AQ5JRC9 791 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 THEMIS2Q5TEJ8 643 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 APOA5Q6Q788 366 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 UBE3BQ7Z3V4 1068 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 TTC17Q96AE7 1141 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 OR14A2Q96R54 314 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 MRI1Q9BV20 369 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 ADAM7Q9H2U9 754 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 PNPOQ9NVS9 261 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CALCOCO1Q9P1Z2 691 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 USP19O94966 1318 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CC2D2AQ9P2K1 1620 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
CHD8-207ENST00000554384 GRM6O15303 877 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 PLIN1O60240 522 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 HRGP04196 525 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 CD1AP06126 327 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 KITP10721 976 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SLC6A4P31645 630 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 EPHB4P54760 987 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 RAP2BP61225 183 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SP140Q13342 867 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SEMA5AQ13591 1074 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 DARS2Q6PI48 645 aaKnown RBP6.47□□□□□ -1.37
CHD8-207ENST00000554384 LIMS2Q7Z4I7 341 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SKAP1Q86WV1 359 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SP8Q8IXZ3 490 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 FAM43AQ8N2R8 423 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 ZNF512Q96ME7 567 aaPredicted RBP6.47□□□□□ -1.37
CHD8-207ENST00000554384 MPHOSPH6Q99547 160 aaKnown RBP6.47□□□□□ -1.37
CHD8-207ENST00000554384 LSM14BQ9BX40 385 aaKnown RBP6.47□□□□□ -1.37
CHD8-207ENST00000554384 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 SLAMF7Q9NQ25 335 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 PPP4R1LQ9P1A2 415 aa6.47□□□□□ -1.37
CHD8-207ENST00000554384 KIAA0391O15091 583 aaKnown RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 LAMTOR5O43504 91 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 PRICKLE3O43900 615 aaPredicted RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 HDCP19113 662 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 HOXA5P20719 270 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 PRDX5P30044 214 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 FLT3LGP49771 235 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 CTSWP56202 376 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 FGL2Q14314 439 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 GJC2Q5T442 439 aaPredicted RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 ZNF529Q6P280 563 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 PDZD4Q76G19 769 aaPredicted RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 MAEAQ7L5Y9 396 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 PLXDC1Q8IUK5 500 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 ELOA2Q8IYF1 753 aaPredicted RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 RNF169Q8NCN4 708 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 CASKIN2Q8WXE0 1202 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 KCNC2Q96PR1 638 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 C11orf54Q9H0W9 315 aaPredicted RBP6.46□□□□□ -1.38
CHD8-207ENST00000554384 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 ZNF536O15090 1300 aa6.46□□□□□ -1.38
CHD8-207ENST00000554384 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 ATP5JP18859 108 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 PEX2P28328 305 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 PTTG1IPP53801 180 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 FAM193AP78312 1265 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 GRM7Q14831 915 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 TBC1D10BQ4KMP7 808 aaPredicted RBP6.45□□□□□ -1.38
CHD8-207ENST00000554384 TCTN3Q6NUS6 607 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 FRMD5Q7Z6J6 570 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 PLEKHH3Q7Z736 793 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 GIMAP8Q8ND71 665 aaPredicted RBP6.45□□□□□ -1.38
CHD8-207ENST00000554384 LRTOMTQ8WZ04 291 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 TNPO1Q92973 898 aaKnown RBP6.45□□□□□ -1.38
CHD8-207ENST00000554384 TBCBQ99426 244 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 CPEB1Q9BZB8 566 aaKnown RBP6.45□□□□□ -1.38
CHD8-207ENST00000554384 XYLT2Q9H1B5 865 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 MRPL46Q9H2W6 279 aaKnown RBP6.45□□□□□ -1.38
CHD8-207ENST00000554384 SEC61A2Q9H9S3 476 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 PLA2G3Q9NZ20 509 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 MOCS1Q9NZB8 636 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 FNIP2Q9P278 1114 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 SH3BP1Q9Y3L3 701 aa6.45□□□□□ -1.38
CHD8-207ENST00000554384 PMS2P1A4D2B8 440 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 GOLIM4O00461 696 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 FOXS1O43638 330 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 NPR1P16066 1061 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 SLC6A2P23975 617 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 SERPINB3P29508 390 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 MSX2P35548 267 aaPredicted RBP6.44□□□□□ -1.38
CHD8-207ENST00000554384 IL12RB1P42701 662 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 CREMQ03060 361 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 EXOSC9Q06265 439 aaKnown RBP6.44□□□□□ -1.38
CHD8-207ENST00000554384 FOXL1Q12952 345 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 PICALMQ13492 652 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 FKBP15Q5T1M5 1219 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 OTUD7BQ6GQQ9 843 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms