RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 RUSC1Q9BVN2 902 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MIR1-1HGQ9H1L0 117 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SYNCQ9H7C4 482 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NRDE2Q9H7Z3 1164 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FAM49BQ9NUQ9 324 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 HCFC1R1Q9NWW0 138 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 WRAP73Q9P2S5 460 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NCDNQ9UBB6 729 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MAGEC2Q9UBF1 373 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CHORDC1Q9UHD1 332 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GTF3C4Q9UKN8 822 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FNDC3AQ9Y2H6 1198 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PCDHA2Q9Y5H9 948 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RPS6KL1Q9Y6S9 549 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CACNA1FO60840 1977 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ABCA7Q8IZY2 2146 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KIF13BQ9NQT8 1826 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SMIM35A0A1B0GVV1 85 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 A0A1W2PRU2 124 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ARL5CA6NH57 179 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PLA2G6O60733 806 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 HUS1O60921 280 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 LRRN2O75325 713 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 DDHD2O94830 711 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CTDNEP1O95476 244 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MOCS2O96007 188 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KRT5P13647 590 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GCFC2P16383 781 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ATP4AP20648 1035 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ADORA2BP29275 332 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 VIPR2P41587 438 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SEC13P55735 322 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KRT85P78386 507 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NUCB2P80303 420 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PPP2R3AQ06190 1150 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CAPSQ13938 189 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 VEPH1Q14D04 833 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NTRK3Q16288 839 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ANO4Q32M45 955 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PLEKHG4Q58EX7 1191 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 XRRA1Q6P2D8 792 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FUT10Q6P4F1 479 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RINLQ6ZS11 566 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KIAA2013Q8IYS2 634 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MRPL38Q96DV4 380 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 POP1Q99575 1024 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MRPL4Q9BYD3 311 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GPR62Q9BZJ7 368 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FOXQ1Q9C009 403 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KATNBL1Q9H079 304 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM117Q9H0C3 514 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SNX25Q9H3E2 840 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KIF9Q9HAQ2 790 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PARVGQ9HBI0 331 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PDE11AQ9HCR9 933 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CD320Q9NPF0 282 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PANK4Q9NVE7 773 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SPATA6Q9NWH7 488 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM161AQ9NX61 479 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MAP3K20Q9NYL2 800 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KIAA1522Q9P206 1035 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 Q9Y3F1 56 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CELSR3Q9NYQ7 3312 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NAV2Q8IVL1 2488 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GOLGA6L22H0YM25 854 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TEX28O15482 410 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 DCXO43602 365 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ENDOD1O94919 500 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 C22orf31O95567 290 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GALTP07902 379 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC192P0DO97 292 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KRT13P13646 458 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GLRA2P23416 452 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 EDNRBP24530 442 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 IGFBP6P24592 240 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CST5P28325 142 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GABRR2P28476 465 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GDI1P31150 447 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PPM1AP35813 382 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TNFSF9P41273 254 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SYKP43405 635 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 NPTX2P47972 431 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 GLUD2P49448 558 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CASP4P49662 377 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SLC26A2P50443 739 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 DNA2P51530 1060 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 YWHAHQ04917 246 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 DDR2Q16832 855 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 USP41Q3LFD5 358 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SLC39A12Q504Y0 691 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 AXDND1Q5T1B0 1012 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CCSAPQ6IQ19 270 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TPGS1Q6ZTW0 290 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PLPPR4Q7Z2D5 763 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KCNK18Q7Z418 384 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RNF135Q8IUD6 432 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC65Q8IXS2 484 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CACTIN-AS1Q8N1I8 211 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TDRD5Q8NAT2 981 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC150Q8NCX0 1101 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms