RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 FPGSQ05932 587 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 PPIGQ13427 754 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRKCH-206ENST00000553830 IKBKEQ14164 716 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 SYCP1Q15431 976 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
PRKCH-206ENST00000553830 AGMOQ6ZNB7 445 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 WDR49Q8IV35 697 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.04
PRKCH-206ENST00000553830 ELMO3Q96BJ8 720 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 RSAD1Q9HA92 442 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 PCDHB7Q9Y5E2 793 aa15.27■□□□□ 0.04
PRKCH-206ENST00000553830 PTPRSQ13332 1948 aa15.27■□□□□ 0.03
PRKCH-206ENST00000553830 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.03
PRKCH-206ENST00000553830 SCN1AP35498 2009 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 ZBBXA8MT70 800 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 KRT19P08727 400 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 GATMP50440 423 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 SCNN1GP51170 649 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 APBA1Q02410 837 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 LRMPQ12912 555 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 FAM117BQ6P1L5 589 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 OTOP2Q7RTS6 562 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 VWCEQ96DN2 955 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 ZMAT2Q96NC0 199 aaKnown RBP15.26■□□□□ 0.03
PRKCH-206ENST00000553830 ASB7Q9H672 318 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 TUBGCP4Q9UGJ1 667 aa15.26■□□□□ 0.03
PRKCH-206ENST00000553830 ARL5CA6NH57 179 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 ZNF623O75123 536 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 LRRN2O75325 713 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 POMCP01189 267 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 ACTN1P12814 892 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 CETN1Q12798 172 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 DUOXA2Q1HG44 320 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 KRT39Q6A163 491 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 SV2AQ7L0J3 742 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 ZNF598Q86UK7 904 aaKnown RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 CD302Q8IX05 232 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 TAS1R2Q8TE23 839 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 CACTINQ8WUQ7 758 aaKnown RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 MRFAP1L1Q96HT8 127 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 LBHD1Q9BQE6 289 aaPredicted RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 PI4K2AQ9BTU6 479 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 TRAIPQ9BWF2 469 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 INTS2Q9H0H0 1204 aaKnown RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 FAM207AQ9NSI2 230 aaPredicted RBP15.25■□□□□ 0.03
PRKCH-206ENST00000553830 MIOSQ9NXC5 875 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 CACNG4Q9UBN1 327 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 GIT1Q9Y2X7 761 aa15.25■□□□□ 0.03
PRKCH-206ENST00000553830 SMIM28A0A1B0GU29 152 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 PTGESO14684 152 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
PRKCH-206ENST00000553830 ITGB3P05106 788 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 SLC9A1P19634 815 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 GTF2H1P32780 548 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 TRPC3Q13507 836 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 EXOC3L4Q17RC7 722 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 GLB1LQ6UWU2 654 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 TRAPPC11Q7Z392 1133 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
PRKCH-206ENST00000553830 VSTM4Q8IW00 320 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 SEMA4DQ92854 862 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 GOLGA2P5Q9HBQ8 144 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 TMEM161AQ9NX61 479 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 DPP3Q9NY33 737 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 PLAGL2Q9UPG8 496 aa15.24■□□□□ 0.03
PRKCH-206ENST00000553830 OFD1O75665 1012 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 VNN1O95497 513 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 EOMESO95936 686 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 FGBP02675 491 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 AMHP03971 560 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 PFKMP08237 780 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
PRKCH-206ENST00000553830 KCNJ6P48051 423 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 EPHB4P54760 987 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 CLDN10P78369 228 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 FAM189BP81408 668 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 DEFB103AP81534 67 aa15.23■□□□□ 0.03
PRKCH-206ENST00000553830 POU5F1Q01860 360 aaKnown RBP15.23■□□□□ 0.03
PRKCH-206ENST00000553830 ENPEPQ07075 957 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms