RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
ATXN3-223ENST00000553686 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 MKL1Q969V6 931 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 ZBTB8AQ96BR9 441 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 DNAJC2Q99543 621 aaKnown RBP7.21□□□□□ -1.26
ATXN3-223ENST00000553686 DNAJC7Q99615 494 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 GORASP1Q9BQQ3 440 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 SMOC1Q9H4F8 434 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 SLC6A20Q9NP91 592 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-223ENST00000553686 NRBP1Q9UHY1 535 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 FAM50BQ9Y247 325 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 PCDHB4Q9Y5E5 795 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 XIRP2A4UGR9 3374 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 PKD1L2Q7Z442 2459 aa7.21□□□□□ -1.26
ATXN3-223ENST00000553686 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 KRIT1O00522 736 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 KRT37O76014 449 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 IFIT1P09914 478 aaKnown RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 COL6A2P12110 1019 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 ATP2A2P16615 1042 aaKnown RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 HOXA5P20719 270 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 RABGGTBP53611 331 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 FAM47AQ5JRC9 791 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 OTOP2Q7RTS6 562 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 PRSS33Q8NF86 280 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 DHRS4Q9BTZ2 278 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 UBE2ZQ9H832 354 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 SPATA6Q9NWH7 488 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-223ENST00000553686 TRAF6Q9Y4K3 522 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 ADAMTS20P59510 1910 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 GAKO14976 1311 aa7.2□□□□□ -1.26
ATXN3-223ENST00000553686 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 MAFKO60675 156 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 ASNSP08243 561 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 ACLYP53396 1101 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 SLURP1P55000 103 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 SUMO1P63165 101 aaKnown RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 NKX3-2P78367 333 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 CALD1Q05682 793 aaKnown RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 PICALMQ13492 652 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 LONRF2Q1L5Z9 754 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 METTL24Q5JXM2 366 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 SYT8Q8NBV8 401 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 FEZF2Q8TBJ5 459 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 ARNTL2Q8WYA1 636 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 ATOH1Q92858 354 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 PTPRN2Q92932 1015 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 C11orf84Q9BUA3 381 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 LUC7LQ9NQ29 371 aaKnown RBP7.19□□□□□ -1.26
ATXN3-223ENST00000553686 MYOTQ9UBF9 498 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 ELP1O95163 1332 aa7.19□□□□□ -1.26
ATXN3-223ENST00000553686 CACNA1BQ00975 2339 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 SH3D21A4FU49 640 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 SMARCA5O60264 1052 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-223ENST00000553686 PDE8BO95263 885 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 PGK1P00558 417 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 SOD2P04179 222 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 CA3P07451 260 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 MYOGP15173 224 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 GRK2P25098 689 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 ADORA2AP29274 412 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 PRDX5P30044 214 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 GRK3P35626 688 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 KCNC1P48547 511 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 CDK7P50613 346 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 GNAI1P63096 354 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 DLX2Q07687 328 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-223ENST00000553686 SPIRE1Q08AE8 756 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 PRAMEF19Q5SWL8 479 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 KRT40Q6A162 431 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 LIPIQ6XZB0 460 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 OTOP3Q7RTS5 596 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 ZDHHC14Q8IZN3 488 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-223ENST00000553686 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 DNAAF4Q8WXU2 420 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 XYLT2Q9H1B5 865 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 CERS4Q9HA82 394 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 GNL3LQ9NVN8 582 aaKnown RBP7.18□□□□□ -1.26
ATXN3-223ENST00000553686 HERC5Q9UII4 1024 aaKnown RBP7.18□□□□□ -1.26
ATXN3-223ENST00000553686 EPG5Q9HCE0 2579 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 ZNF536O15090 1300 aa7.18□□□□□ -1.26
ATXN3-223ENST00000553686 KIF16BQ96L93 1317 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms