RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 FAM171A1Q5VUB5 890 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 PDXDC1Q6P996 788 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 RTL10Q7L3V2 364 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
SRP54-203ENST00000553544 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
SRP54-203ENST00000553544 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
SRP54-203ENST00000553544 KLK14Q9P0G3 267 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 GMEB2Q9UKD1 530 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
SRP54-203ENST00000553544 FANCMQ8IYD8 2048 aa13.04□□□□□ -0.32
SRP54-203ENST00000553544 MYH11P35749 1972 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 A0A087WWV3 80 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 MUTP22033 750 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■□□□□ 8.3
SRP54-203ENST00000553544 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
SRP54-203ENST00000553544 TUSC3Q13454 348 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
SRP54-203ENST00000553544 PDIA5Q14554 519 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 NBR1Q14596 966 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 PSMD5Q16401 504 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
SRP54-203ENST00000553544 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
SRP54-203ENST00000553544 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 TPRG1Q6ZUI0 275 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 CELF5Q8N6W0 485 aaKnown RBP13.03□□□□□ -0.32
SRP54-203ENST00000553544 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
SRP54-203ENST00000553544 MTCL1Q9Y4B5 1905 aaKnown RBP13.02□□□□□ -0.32
SRP54-203ENST00000553544 ECI2O75521 394 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 NPTXRO95502 500 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 ADRB1P08588 477 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 POU2F2P09086 479 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
SRP54-203ENST00000553544 GJB2P29033 226 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 MTAPQ13126 283 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 PTGDRQ13258 359 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 FZD5Q13467 585 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 RAB33AQ14088 237 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 PPP2R5DQ14738 602 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 AMHR2Q16671 573 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 ASAP3Q8TDY4 903 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 NFKBIZQ9BYH8 718 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 PRMT8Q9NR22 394 aaPredicted RBP13.02□□□□□ -0.33
SRP54-203ENST00000553544 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
SRP54-203ENST00000553544 DNMT3BQ9UBC3 853 aaKnown RBP13.02□□□□□ -0.33
SRP54-203ENST00000553544 MRPS23Q9Y3D9 190 aaKnown RBP13.02□□□□□ -0.33
SRP54-203ENST00000553544 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.33
SRP54-203ENST00000553544 LAD1O00515 517 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 MAN2B1O00754 1011 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 THP07101 528 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 GLRA2P23416 452 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 OR1D2P34982 312 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
SRP54-203ENST00000553544 CAPSQ13938 189 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 ECM1Q16610 540 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
SRP54-203ENST00000553544 NPAS3Q8IXF0 933 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 IGSF22Q8N9C0 903 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 MCRS1Q96EZ8 462 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 PAAF1Q9BRP4 392 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 HEBP1Q9NRV9 189 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 ZMYM2Q9UBW7 1377 aa13.01□□□□□ -0.33
SRP54-203ENST00000553544 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
SRP54-203ENST00000553544 ADAM12O43184 909 aa13□□□□□ -0.33
SRP54-203ENST00000553544 B4GALT5O43286 388 aa13□□□□□ -0.33
SRP54-203ENST00000553544 USO1O60763 962 aaKnown RBP13□□□□□ -0.33
SRP54-203ENST00000553544 PTPN2P17706 415 aa13□□□□□ -0.33
SRP54-203ENST00000553544 PRPHP41219 470 aa13□□□□□ -0.33
SRP54-203ENST00000553544 SPEM2Q0P670 501 aa13□□□□□ -0.33
SRP54-203ENST00000553544 CUL4AQ13619 759 aa13□□□□□ -0.33
SRP54-203ENST00000553544 IL17AQ16552 155 aa13□□□□□ -0.33
SRP54-203ENST00000553544 RILPL1Q5EBL4 403 aa13□□□□□ -0.33
SRP54-203ENST00000553544 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
SRP54-203ENST00000553544 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
SRP54-203ENST00000553544 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
SRP54-203ENST00000553544 NETO1Q8TDF5 533 aa13□□□□□ -0.33
SRP54-203ENST00000553544 ING5Q8WYH8 240 aa13□□□□□ -0.33
SRP54-203ENST00000553544 ELSPBP1Q96BH3 223 aa13□□□□□ -0.33
SRP54-203ENST00000553544 CCDC43Q96MW1 224 aaKnown RBP13□□□□□ -0.33
SRP54-203ENST00000553544 PLA2G2FQ9BZM2 168 aa13□□□□□ -0.33
SRP54-203ENST00000553544 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms