RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 H7BY64 318 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 M0R2C6 588 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 EYA4O95677 639 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 IGHDP01880 384 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 APPP05067 770 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SLC6A11P48066 632 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 RGS3P49796 1198 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 DNM2P50570 870 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 RBM10P98175 930 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 STRN3Q13033 797 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SKOR2Q2VWA4 1001 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 APOBEC3HQ6NTF7 200 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 OVCH1Q7RTY7 1134 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SAPCD2Q86UD0 394 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 PRPF38AQ8NAV1 312 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 RILPL2Q969X0 211 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 GCC1Q96CN9 775 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 TRMT2BQ96GJ1 504 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 ZBED3Q96IU2 234 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 KCNJ15Q99712 375 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 ORAI3Q9BRQ5 295 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CBLCQ9ULV8 474 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 COL1A1P02452 1464 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 MROH7-TTC4A0A0A0MT08 1334 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 A0A0G2JLL6 359 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 CBX4O00257 560 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 ERC2O15083 957 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 ATP5JP18859 108 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 DHCR24Q15392 516 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 MROH9Q5TGP6 573 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 C16orf59Q7L2K0 433 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 DCP2Q8IU60 420 aaKnown RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 OTUD7AQ8TE49 926 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 SEC14L1Q92503 715 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-220ENST00000553491 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 MGAMO43451 1857 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 DOCK1Q14185 1865 aa5.58□□□□□ -1.52
ATXN3-220ENST00000553491 PAPPA2Q9BXP8 1791 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 CNTNAP1P78357 1384 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 DOCK3Q8IZD9 2030 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ZNF532Q9HCE3 1301 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 MYH6P13533 1939 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 GPR75-ASB3A0A0A6YYF3 556 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 RASSF10A6NK89 507 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ZNF891A8MT65 544 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 C8BP07358 591 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 PDE6AP16499 860 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 MX1P20591 662 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 FKBP1BP68106 108 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 MAP2K1Q02750 393 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 HDAC1Q13547 482 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 FAM47CQ5HY64 1035 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 LHFPL2Q6ZUX7 228 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ADGRA1Q86SQ6 560 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 FAM83AQ86UY5 434 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 KIF18BQ86Y91 864 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 NXPE1Q8N323 547 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ZKSCAN4Q969J2 545 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 SYT3Q9BQG1 590 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 ARMT1Q9H993 441 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 SPATA6Q9NWH7 488 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
ATXN3-220ENST00000553491 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 PHIPQ8WWQ0 1821 aa5.57□□□□□ -1.52
ATXN3-220ENST00000553491 PTPRFP10586 1907 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms