RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PPP2R3AQ06190 1150 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 ADAM15Q13444 863 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 UPP1Q16831 310 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 FUT10Q6P4F1 479 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 SYCP3Q8IZU3 236 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 FMR1NBQ8N0W7 255 aaPredicted RBP20.1■□□□□ 0.81
CPSF2-202ENST00000553427 TMEM87AQ8NBN3 555 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 POMGNT1Q8WZA1 660 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 IKZF4Q9H2S9 585 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
CPSF2-202ENST00000553427 CHST7Q9NS84 486 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 SSX2IPQ9Y2D8 614 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 LILRB3O75022 631 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 CXCL14O95715 111 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 RPL9P32969 192 aaKnown RBP20.09■□□□□ 0.81
CPSF2-202ENST00000553427 HOXD13P35453 343 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 SNRPFP62306 86 aaKnown RBP20.09■□□□□ 0.81
CPSF2-202ENST00000553427 FAM160A1Q05DH4 1040 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 SOX4Q06945 474 aaPredicted RBP20.09■□□□□ 0.81
CPSF2-202ENST00000553427 ELAVL2Q12926 359 aaKnown RBP20.09■□□□□ 0.81
CPSF2-202ENST00000553427 PSMD2Q13200 908 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 KCNC3Q14003 757 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 ZBTB6Q15916 424 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 LEXMQ3ZCV2 418 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 KANK3Q6NY19 840 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 DCLRE1AQ6PJP8 1040 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 ENGASEQ8NFI3 743 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 SCFD1Q8WVM8 642 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 ASB2Q96Q27 587 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 EXOC1Q9NV70 894 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 CLDND1Q9NY35 253 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 DERAQ9Y315 318 aa20.09■□□□□ 0.81
CPSF2-202ENST00000553427 PDCD11Q14690 1871 aaKnown RBP20.08■□□□□ 0.81
CPSF2-202ENST00000553427 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.08■□□□□ 0.81
CPSF2-202ENST00000553427 TADA2AO75478 443 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 URODP06132 367 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 CYP3A5P20815 502 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
CPSF2-202ENST00000553427 LTBRP36941 435 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 GLUD2P49448 558 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 DSG1Q02413 1049 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 DPYDQ12882 1025 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 TMEM184AQ6ZMB5 413 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 GPR62Q9BZJ7 368 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 ASB7Q9H672 318 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 MRPL17Q9NRX2 175 aaKnown RBP20.08■□□□□ 0.81
CPSF2-202ENST00000553427 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
CPSF2-202ENST00000553427 UBQLN1Q9UMX0 589 aaKnown RBP20.08■□□□□ 0.81
CPSF2-202ENST00000553427 TRIP11Q15643 1979 aa20.08■□□□□ 0.8
CPSF2-202ENST00000553427 LACTBL1A8MY62 500 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 XPOTO43592 962 aaKnown RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 TBX10O75333 385 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 GLP2RO95838 553 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 LDHAP00338 332 aaKnown RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 KCNA5P22460 613 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 LRPAP1P30533 357 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 ACOT2P49753 483 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 CLCNKBP51801 687 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 TFF2Q03403 129 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 USP41Q3LFD5 358 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 KMT5BQ4FZB7 885 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 TJAP1Q5JTD0 557 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 KIAA0319Q5VV43 1072 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 CRELD2Q6UXH1 353 aaPredicted RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 GOLGA2P5Q9HBQ8 144 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 CGNQ9P2M7 1197 aaKnown RBP20.07■□□□□ 0.8
CPSF2-202ENST00000553427 C2CD2Q9Y426 696 aa20.07■□□□□ 0.8
CPSF2-202ENST00000553427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 PODXLO00592 558 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 PER2O15055 1255 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 LINC01565O15544 149 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 EXTL3O43909 919 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 CLASP2O75122 1294 aaKnown RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 B3GAT3O94766 335 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 RPN1P04843 607 aaKnown RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 PRR29P0C7W0 189 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 SRGAP2BP0DMP2 458 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 KCNB1Q14721 858 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 PUS10Q3MIT2 529 aaKnown RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 CD300LGQ6UXG3 332 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 TAS1R1Q7RTX1 841 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 BRSK2Q8IWQ3 736 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 KIAA0895Q8NCT3 520 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 VN1R2Q8NFZ6 395 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 AUTS2Q8WXX7 1259 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 RABGGTAQ92696 567 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 CCDC47Q96A33 483 aaKnown RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 C18orf25Q96B23 403 aaPredicted RBP20.06■□□□□ 0.8
CPSF2-202ENST00000553427 KIF12Q96FN5 646 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 MSLNLQ96KJ4 702 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 TIGD1Q96MW7 591 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 CBWD1Q9BRT8 395 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 EMILIN2Q9BXX0 1053 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 IGFLR1Q9H665 355 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 RXFP1Q9HBX9 757 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 SLC39A2Q9NP94 309 aa20.06■□□□□ 0.8
CPSF2-202ENST00000553427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms