RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 UVSSAQ2YD98 709 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 EEF1DP3Q658K8 133 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 TANGO2Q6ICL3 276 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 PDXDC1Q6P996 788 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 CD300LGQ6UXG3 332 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 ZNF852Q6ZMS4 543 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 ZBTB8OSQ8IWT0 167 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 SECISBP2LQ93073 1101 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 GOLGA2P5Q9HBQ8 144 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 PARD6AQ9NPB6 346 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 PDRG1Q9NUG6 133 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 NDRG2Q9UN36 371 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 GDAQ9Y2T3 454 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 PRR5-ARHGAP8B1AHC4 643 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 TMEM189-UBE2V1I3L0A0 370 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-209ENST00000553308 NCAM2O15394 837 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 NEMFO60524 1076 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 B3GAT3O94766 335 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 PRKCBP05771 671 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 SPATA31C1P0DKV0 1188 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 TDGF1P13385 188 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 SDHBP21912 280 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 FCARP24071 287 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 KRT2P35908 639 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 TXKP42681 527 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 BRCC3P46736 316 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 CLCNKBP51801 687 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ARHGAP8P85298 464 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ADCY1Q08828 1119 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 LPAL2Q16609 132 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 C3orf58Q8NDZ4 430 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 PPP1R10Q96QC0 940 aaKnown RBP10.02□□□□□ -0.81
SYNE2-209ENST00000553308 NELL2Q99435 816 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ADPGKQ9BRR6 497 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 TM6SF1Q9BZW5 370 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 CCDC113Q9H0I3 377 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 GDE1Q9NZC3 331 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-209ENST00000553308 GMEB2Q9UKD1 530 aa10.02□□□□□ -0.81
SYNE2-209ENST00000553308 MRPS17Q9Y2R5 130 aaKnown RBP10.02□□□□□ -0.81
SYNE2-209ENST00000553308 TBC1D4O60343 1298 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 MED24O75448 989 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 RBM25P49756 843 aaKnown RBP10.01□□□□□ -0.81
SYNE2-209ENST00000553308 ROR1Q01973 937 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 MAPK6Q16659 721 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 UPP1Q16831 310 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 PRSS36Q5K4E3 855 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 ANKS3Q6ZW76 656 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 RTL10Q7L3V2 364 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 MCPH1Q8NEM0 835 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 DNASE1L2Q92874 299 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 ELSPBP1Q96BH3 223 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 TCEAL4Q96EI5 215 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 RTKNQ9BST9 563 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 KIFC3Q9BVG8 833 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 C2orf40Q9H1Z8 148 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 CHRDQ9H2X0 955 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 AVENQ9NQS1 362 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-209ENST00000553308 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 BACE2Q9Y5Z0 518 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.01□□□□□ -0.81
SYNE2-209ENST00000553308 CACNA1BQ00975 2339 aa10.01□□□□□ -0.81
SYNE2-209ENST00000553308 FRYLO94915 3013 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 TICRRQ7Z2Z1 1910 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 ARHGEF37A1IGU5 675 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 WDR27A2RRH5 827 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 ACKR2O00590 384 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 PRRG1O14668 218 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 PFKFB2O60825 505 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 LRG1P02750 347 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.81
SYNE2-209ENST00000553308 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
SYNE2-209ENST00000553308 PTPN2P17706 415 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 CCR2P41597 374 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 FOSBP53539 338 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 SOX4Q06945 474 aaPredicted RBP10□□□□□ -0.81
SYNE2-209ENST00000553308 DCAF4L1Q3SXM0 396 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 FAM78AQ5JUQ0 283 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 CATSPER3Q86XQ3 398 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 CEP120Q8N960 986 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 DEPTORQ8TB45 409 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 CORO1BQ9BR76 489 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 FAM126AQ9BYI3 521 aaPredicted RBP10□□□□□ -0.81
SYNE2-209ENST00000553308 TMEM60Q9H2L4 133 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 BRD9Q9H8M2 597 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 ZFP14Q9HCL3 533 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 POLD4Q9HCU8 107 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 BRMS1Q9HCU9 246 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 NCANO14594 1321 aa10□□□□□ -0.81
SYNE2-209ENST00000553308 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms