RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 EPHA7Q15375 998 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 LAIR1Q6GTX8 287 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 SLC27A1Q6PCB7 646 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 CD300LGQ6UXG3 332 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 DAGLBQ8NCG7 672 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 KCNB2Q92953 911 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
CDK4-213ENST00000552713 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
CDK4-213ENST00000552713 AGXT2Q9BYV1 514 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 SEMA4GQ9NTN9 838 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 C2orf42Q9NWW7 574 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 USP20Q9Y2K6 914 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
CDK4-213ENST00000552713 PPME1Q9Y570 386 aa9.41□□□□□ -0.9
CDK4-213ENST00000552713 CHURC1-FNTBB4DL54 471 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 I3L4J1 428 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 EDN1P05305 212 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 RETP07949 1114 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 POU2F2P09086 479 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 CCR2P41597 374 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 FNTBP49356 437 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 POU5F1BQ06416 359 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 MXD4Q14582 209 aaPredicted RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 GSE1Q14687 1217 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 PCBP1Q15365 356 aaKnown RBP eCLIP9.4□□□□□ -0.97e-10■■■■□ 21.8
CDK4-213ENST00000552713 UVSSAQ2YD98 709 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 FAM78AQ5JUQ0 283 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 PRSS36Q5K4E3 855 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 N4BP2L1Q5TBK1 243 aaPredicted RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 TPH2Q8IWU9 490 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 ELSPBP1Q96BH3 223 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 FAM20AQ96MK3 541 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 LMAN1LQ9HAT1 526 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 SNTG2Q9NY99 539 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 MTRRQ9UBK8 725 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 KCNJ14Q9UNX9 436 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 MRPS17Q9Y2R5 130 aaKnown RBP9.4□□□□□ -0.9
CDK4-213ENST00000552713 SNX14Q9Y5W7 946 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 CDY1Q9Y6F8 540 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 DENND4CQ5VZ89 1909 aa9.4□□□□□ -0.9
CDK4-213ENST00000552713 ZMYM2Q9UBW7 1377 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 MYO16Q9Y6X6 1858 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 DKC1O60832 514 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDK4-213ENST00000552713 RECQL4O94761 1208 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 SLITRK3O94933 977 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 CHRNB1P11230 501 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 HOXB3P14651 431 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 FGFR3P22607 806 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 RPS6KB1P23443 525 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 TKTP29401 623 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 TFDP1Q14186 410 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 SIM2Q14190 667 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 CSRP2Q16527 193 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 EARS2Q5JPH6 523 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 VITQ6UXI7 678 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 OTUD6AQ7L8S5 288 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 ABCA7Q8IZY2 2146 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 FBXL16Q8N461 479 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 FAM3CQ92520 227 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 DNASE1L2Q92874 299 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 TMEM121BQ9BXQ6 578 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 NFKBIZQ9BYH8 718 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 ZNF334Q9HCZ1 680 aaPredicted RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 GJB4Q9NTQ9 266 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 RBM12Q9NTZ6 932 aaKnown RBP9.39□□□□□ -0.91
CDK4-213ENST00000552713 GDE1Q9NZC3 331 aa9.39□□□□□ -0.91
CDK4-213ENST00000552713 ATRXP46100 2492 aa9.38□□□□□ -0.91
CDK4-213ENST00000552713 K7ESF4 209 aa9.38□□□□□ -0.91
CDK4-213ENST00000552713 TBX3O15119 743 aa9.38□□□□□ -0.91
CDK4-213ENST00000552713 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
CDK4-213ENST00000552713 LRP3O75074 770 aa9.38□□□□□ -0.91
CDK4-213ENST00000552713 MOSPD3O75425 235 aa9.38□□□□□ -0.91
CDK4-213ENST00000552713 SEC24AO95486 1093 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms