RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 GFPT1Q06210 699 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 KLHL30Q0D2K2 578 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 LRRC41Q15345 812 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 ASIC2Q16515 512 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 CDC37Q16543 378 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TDRD12Q587J7 1177 aaKnown RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 HERC4Q5GLZ8 1057 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 OVOS1Q6IE37 1185 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 PRR5LQ6MZQ0 368 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 C8orf74Q6P047 294 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 NFRKBQ6P4R8 1299 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 HHIPL2Q6UWX4 724 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 JAZF1Q86VZ6 243 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 SPATS2Q86XZ4 545 aaKnown RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 SP8Q8IXZ3 490 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TAF4BQ92750 862 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 EEF2KMTQ96G04 330 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 FAM20AQ96MK3 541 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 RUFY1Q96T51 708 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 MRIQ9BWK5 157 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 KCTD10Q9H3F6 313 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 METTL14Q9HCE5 456 aaKnown RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TMEM51Q9NW97 253 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 KLHL3Q9UH77 587 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 SERPINB13Q9UIV8 391 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 INTUQ9ULD6 942 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TRAF3IP3Q9Y228 551 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 HIF3AQ9Y2N7 669 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 DAAM1Q9Y4D1 1078 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 DAGLAQ9Y4D2 1042 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 A0A087WUV0 522 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 A0A1W2PQH9 124 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SHTN1A0MZ66 631 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 GTPBP10A4D1E9 387 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 MEGF11A6BM72 1044 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SRRM3A6NNA2 597 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 PDXKO00764 312 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 EIF3HO15372 352 aaKnown RBP eCLIP6.51□□□□□ -1.372e-6■□□□□ 9.8
CHMP4A-210ENST00000552620 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TLR2O60603 784 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 DLGAP3O95886 979 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 FOSP01100 380 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SERPINB2P05120 415 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 MYBL2P10244 700 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 NME1P15531 152 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 CYP11B2P19099 503 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 PRKCIP41743 596 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 EPS15P42566 896 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC1A4P43007 532 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 MMP14P50281 582 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC12A3P55017 1021 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 NPEPPSP55786 919 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 POLR2FP61218 127 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TRAF1Q13077 416 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 ADAM9Q13443 819 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 RPS6KA1Q15418 735 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 Q4G0T1 1027 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 CFAP58Q5T655 872 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 RUFY4Q6ZNE9 571 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 ACAD11Q709F0 780 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SMIM5Q71RC9 77 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 B4GALNT4Q76KP1 1039 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 KCNK18Q7Z418 384 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 VPS36Q86VN1 386 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 GPBP1Q86WP2 473 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 IQCKQ8N0W5 287 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 LRRC47Q8N1G4 583 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SYT2Q8N9I0 419 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 ACTRT1Q8TDG2 376 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SMCR8Q8TEV9 937 aaPredicted RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 HDAC7Q8WUI4 952 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 SCFD1Q8WVM8 642 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 PPM1EQ8WY54 764 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TBC1D5Q92609 795 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 CAPS2Q9BXY5 557 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 GANQ9H2C0 597 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TNKS2Q9H2K2 1166 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 DHX36Q9H2U1 1008 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 KCNMB3Q9NPA1 279 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 NYAP2Q9P242 653 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 POLLQ9UGP5 575 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 RSPH14Q9UHP6 348 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 TMEM59LQ9UK28 342 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 DNM3Q9UQ16 869 aa6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
CHMP4A-210ENST00000552620 DDX60LQ5H9U9 1706 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms