RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 SLC13A1Q9BZW2 595 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 CFAP157Q5JU67 520 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 LRRC55Q6ZSA7 311 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 TMEM35BQ8NCS4 154 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 SPATC1LQ9H0A9 340 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 B4GALT5O43286 388 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 RALAP11233 206 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 PHKA2P46019 1235 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 EDRF1Q3B7T1 1238 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 ATF7IP2Q5U623 682 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 CCNI2Q6ZMN8 369 aaPredicted RBP11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 ABI1Q8IZP0 508 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 DDX3XO00571 662 aaKnown RBP eCLIP11.46□□□□□ -0.574e-12■■■■■ 74.6
TGFBR1-209ENST00000552516 ZNF263O14978 683 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 TBX3O15119 743 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 ADRB2P07550 413 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 CA4P22748 312 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 PLCB4Q15147 1175 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 ACOT1Q86TX2 421 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 CASKIN2Q8WXE0 1202 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 EXT2Q93063 718 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 WDR70Q9NW82 654 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 SEL1LQ9UBV2 794 aa11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
TGFBR1-209ENST00000552516 F8VZ95 297 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 FSTL1Q12841 308 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 SEPT6Q14141 434 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 TPCN2Q8NHX9 752 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 TTC17Q96AE7 1141 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 ERLEC1Q96DZ1 483 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 NUDT5Q9UKK9 219 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 ODF2LQ9ULJ1 636 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 H0YCG3 227 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 RPSAP08865 295 aaKnown RBP11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.58
TGFBR1-209ENST00000552516 ARSEP51690 589 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 TUBB4BP68371 445 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MYO1EQ12965 1108 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 DRP2Q13474 957 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 SLFN12LQ6IEE8 588 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 RYBPQ8N488 228 aaPredicted RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 GIMAP7Q8NHV1 300 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MED4Q9NPJ6 270 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 KNL1Q8NG31 2342 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 CLUL1Q15846 466 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 FOXR1Q6PIV2 292 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ANKRD13AQ8IZ07 590 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 CACNA2D3Q8IZS8 1091 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 L2HGDHQ9H9P8 463 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 KCNMB3Q9NPA1 279 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 FOXO6A8MYZ6 492 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MCF2LO15068 1137 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MRPS9P82933 396 aaKnown RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 HIPK4Q8NE63 616 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ETNPPLQ8TBG4 499 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 FUT8Q9BYC5 575 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ASTN1O14525 1302 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ZBED1O96006 694 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 KRT3P12035 628 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 PDE1BQ01064 536 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 HSDL1Q3SXM5 330 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 NXNQ6DKJ4 435 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 FAF2Q96CS3 445 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 TLR10Q9BXR5 811 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 GOLGA8KD6RF30 607 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 C2CD2LO14523 706 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 CCNE2O96020 404 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 INSRRP14616 1297 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 PDIA2Q13087 525 aaKnown RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MTMR3Q13615 1198 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ZRSR2Q15696 482 aaKnown RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 MDH1BQ5I0G3 518 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 TRAPPC11Q7Z392 1133 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ADAM32Q8TC27 787 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 PYROXD1Q8WU10 500 aa11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 PDCD6IPQ8WUM4 868 aaKnown RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 TAF1DQ9H5J8 278 aaPredicted RBP11.45□□□□□ -0.58
TGFBR1-209ENST00000552516 ANO9A1A5B4 782 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 PSMD10O75832 226 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 CYP11B1P15538 503 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 SESN2P58004 480 aaPredicted RBP11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 C1orf186Q6ZWK4 172 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 TAOK1Q7L7X3 1001 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 SIAH1Q8IUQ4 282 aa11.44□□□□□ -0.58
TGFBR1-209ENST00000552516 STMN4Q9H169 189 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms