RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 FAM126AQ9BYI3 521 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-222ENST00000552465 AVENQ9NQS1 362 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-222ENST00000552465 USP18Q9UMW8 372 aa18.66■□□□□ 0.58
CACNB3-222ENST00000552465 BACE2Q9Y5Z0 518 aa18.66■□□□□ 0.58
CACNB3-222ENST00000552465 STK36Q9NRP7 1315 aa18.66■□□□□ 0.58
CACNB3-222ENST00000552465 MIA3Q5JRA6 1907 aa18.66■□□□□ 0.58
CACNB3-222ENST00000552465 DCDC2BA2VCK2 349 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 TMEM189-UBE2V1I3L0A0 370 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 DTNBO60941 627 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 B3GAT3O94766 335 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
CACNB3-222ENST00000552465 NR5A1Q13285 461 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 PRPF4BQ13523 1007 aaKnown RBP18.65■□□□□ 0.58
CACNB3-222ENST00000552465 TMEM132AQ24JP5 1023 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 CD300LGQ6UXG3 332 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 TNFRSF25Q93038 417 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 ELSPBP1Q96BH3 223 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 PARD6AQ9NPB6 346 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 GMEB2Q9UKD1 530 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 USP20Q9Y2K6 914 aa18.65■□□□□ 0.58
CACNB3-222ENST00000552465 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
CACNB3-222ENST00000552465 PTPN2P17706 415 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 TXKP42681 527 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 MAMSTRQ6ZN01 415 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 ZNF687Q8N1G0 1237 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 MCPH1Q8NEM0 835 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 DNASE1L2Q92874 299 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 ADPGKQ9BRR6 497 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 GDAQ9Y2T3 454 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 PATJQ8NI35 1801 aa18.64■□□□□ 0.57
CACNB3-222ENST00000552465 ACKR2O00590 384 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 MAN2B1O00754 1011 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 TDGF1P13385 188 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 CEBPBP17676 345 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 ATP2B1P20020 1258 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 TKTP29401 623 aaKnown RBP18.63■□□□□ 0.57
CACNB3-222ENST00000552465 KRT2P35908 639 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 CLCNKBP51801 687 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 MAPK6Q16659 721 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 EEF1DP3Q658K8 133 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 ANKS3Q6ZW76 656 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 BSNDQ8WZ55 320 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 DDX27Q96GQ7 796 aaKnown RBP18.63■□□□□ 0.57
CACNB3-222ENST00000552465 PPP1R10Q96QC0 940 aaKnown RBP18.63■□□□□ 0.57
CACNB3-222ENST00000552465 MTMR9Q96QG7 549 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 CHRDQ9H2X0 955 aa18.63■□□□□ 0.57
CACNB3-222ENST00000552465 NOTCH4Q99466 2003 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 CACNA1BQ00975 2339 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 ARHGEF37A1IGU5 675 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 TRAPPC3O43617 180 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 PFKFB2O60825 505 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 PRKCBP05771 671 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 FCARP24071 287 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 NRLP54845 237 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 UPP1Q16831 310 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 GLRA4Q5JXX5 417 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 PRSS36Q5K4E3 855 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 UROC1Q96N76 676 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 BRD9Q9H8M2 597 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 ZFP14Q9HCL3 533 aa18.62■□□□□ 0.57
CACNB3-222ENST00000552465 ORC3Q9UBD5 711 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-222ENST00000552465 NDRG2Q9UN36 371 aaKnown RBP18.62■□□□□ 0.57
CACNB3-222ENST00000552465 I3L4J1 428 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 ABLIM3O94929 683 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 LRG1P02750 347 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 EDN1P05305 212 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 LIG1P18858 919 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 BRCC3P46736 316 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 GRM2Q14416 872 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 DCAF4L1Q3SXM0 396 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 FAM78AQ5JUQ0 283 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 SLC8B1Q6J4K2 584 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 CELF5Q8N6W0 485 aaKnown RBP18.61■□□□□ 0.57
CACNB3-222ENST00000552465 WASF1Q92558 559 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 IER2Q9BTL4 223 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 TRMT61BQ9BVS5 477 aaKnown RBP18.61■□□□□ 0.57
CACNB3-222ENST00000552465 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 RAB23Q9ULC3 237 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
CACNB3-222ENST00000552465 WNT7AO00755 349 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 NEMFO60524 1076 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 MICAL2O94851 1124 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 ADRB1P08588 477 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 ELF1P32519 619 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 NAMPTP43490 491 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 ROR1Q01973 937 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 SPEM2Q0P670 501 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 LPAL2Q16609 132 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 LAIR1Q6GTX8 287 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 C3orf58Q8NDZ4 430 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 DEPTORQ8TB45 409 aa18.6■□□□□ 0.57
CACNB3-222ENST00000552465 TCEAL4Q96EI5 215 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms