RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440		H7C0S8	307 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	FFAR2	O15552	330 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	TGM5	O43548	720 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	MAF	O75444	373 aa	Predicted RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	SKAP2	O75563	359 aa	Predicted RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	APOA4	P06727	396 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	GSTM1	P09488	218 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	PARP1	P09874	1014 aa	Known RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	DNM2	P50570	870 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	PLP2	Q04941	152 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	E2F5	Q15329	346 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	CNN3	Q15417	329 aa	Known RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	FAM47C	Q5HY64	1035 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	OTOP1	Q7RTM1	612 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	CABP7	Q86V35	215 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	SYTL1	Q8IYJ3	562 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	EFHB	Q8N7U6	833 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	CCDC191	Q8NCU4	936 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	LMBR1	Q8WVP7	490 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	DPF3	Q92784	378 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	FBXW5	Q969U6	566 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	CFAP53	Q96M91	514 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	IPPK	Q9H8X2	491 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	ZWILCH	Q9H900	591 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	JMJD4	Q9H9V9	463 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440	MTRR	Q9UBK8	725 aa		4.74	□□□□□ -1.65
USP44-208	ENST00000552440	DBR1	Q9UK59	544 aa	Known RBP	4.74	□□□□□ -1.65
USP44-208	ENST00000552440		A0A1W2PPH5	198 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	PGPEP1L	A6NFU8	196 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CAPN8	A6NHC0	703 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	GOLGA8A	A7E2F4	631 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	GOLGA8B	A8MQT2	603 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440		H0Y3Z8	333 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	HOXC11	O43248	304 aa	Predicted RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	TADA3	O75528	432 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	HSPA4L	O95757	839 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	SLC3A2	P08195	630 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	IGFBP6	P24592	240 aa	Predicted RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	MRE11	P49959	708 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	GALNT1	Q10472	559 aa	Predicted RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CDC16	Q13042	620 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	SCARB2	Q14108	478 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CC2D1B	Q5T0F9	858 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	EEF1DP3	Q658K8	133 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	SLC30A6	Q6NXT4	461 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	APOA5	Q6Q788	366 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	C16orf59	Q7L2K0	433 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	KDELC2	Q7Z4H8	507 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	ZDHHC14	Q8IZN3	488 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CISD2	Q8N5K1	135 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	SIMC1	Q8NDZ2	872 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	ZMIZ2	Q8NF64	920 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	YTHDC1	Q96MU7	727 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	JMJD8	Q96S16	334 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	MMP19	Q99542	508 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	BTBD1	Q9H0C5	482 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	DHX36	Q9H2U1	1008 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CYP4F11	Q9HBI6	524 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	PCDH18	Q9HCL0	1135 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	USP40	Q9NVE5	1235 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	DACT1	Q9NYF0	836 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	WDR35	Q9P2L0	1181 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	HERC5	Q9UII4	1024 aa	Known RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	CBLC	Q9ULV8	474 aa		4.73	□□□□□ -1.65
USP44-208	ENST00000552440	SOS1	Q07889	1333 aa	Predicted RBP	4.73	□□□□□ -1.65
USP44-208	ENST00000552440	RTCA	O00442	366 aa	Known RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	GSTA4	O15217	222 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	USO1	O60763	962 aa	Known RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	FGF18	O76093	207 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	TNNT3	P45378	269 aa	Predicted RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	AGFG1	P52594	562 aa	Known RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	NR1H2	P55055	460 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	HSD17B7	P56937	341 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	POLD3	Q15054	466 aa	Predicted RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	ARHGAP44	Q17R89	818 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	INF2	Q27J81	1249 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	ANO6	Q4KMQ2	910 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	ARMC4	Q5T2S8	1044 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	MBLAC2	Q68D91	279 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	BICRAL	Q6AI39	1079 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	GGT6	Q6P531	493 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	USP45	Q70EL2	814 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	C2orf69	Q8N8R5	385 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	ERCC4	Q92889	916 aa	Predicted RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	TIGD1	Q96MW7	591 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	NCAPG	Q9BPX3	1015 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	SLF1	Q9BQI6	1058 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	LRFN3	Q9BTN0	628 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	SORBS1	Q9BX66	1292 aa	Known RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	CDIP1	Q9H305	208 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	NUDT5	Q9UKK9	219 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	PCDHA2	Q9Y5H9	948 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	USP19	O94966	1318 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	FAM47E-STBD1	D6RA91	191 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	FOXN3	O00409	490 aa	Predicted RBP	4.72	□□□□□ -1.65
USP44-208	ENST00000552440	DOK2	O60496	412 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	MSL3P1	P0C860	447 aa		4.72	□□□□□ -1.65
USP44-208	ENST00000552440	PDC	P20941	246 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms