RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 ADSSP30520 456 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 TNFSF9P41273 254 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 ACOT2P49753 483 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 PPP2R3AQ06190 1150 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 CAMK1Q14012 370 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 KCNB1Q14721 858 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 LEXMQ3ZCV2 418 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 GLRA4Q5JXX5 417 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 ARMCX5Q6P1M9 558 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 DCLRE1AQ6PJP8 1040 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 HS2ST1Q7LGA3 356 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 VPS52Q8N1B4 723 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 GLIS3Q8NEA6 775 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 CXCL16Q9H2A7 254 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 NSUN3Q9H649 340 aaKnown RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 NGRNQ9NPE2 291 aaKnown RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 RMND1Q9NWS8 449 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 CNTN3Q9P232 1028 aa11.56□□□□□ -0.56
PTCH1-225ENST00000551845 CGNQ9P2M7 1197 aaKnown RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 PRG3Q9Y2Y8 225 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 TTC26A0AVF1 554 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 CASTOR2A6NHX0 329 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 LACTBL1A8MY62 500 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 TISP43B9A030 160 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 DCXO43602 365 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 NCK2O43639 380 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 CXCL14O95715 111 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 CXCL8P10145 99 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 DNAJB1P25685 340 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 RPL9P32969 192 aaKnown RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 HOXD13P35453 343 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 ERVFC1P60507 584 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 PNOCQ13519 176 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 BMT2Q1RMZ1 405 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 TIGD5Q53EQ6 642 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 GOLGA5Q8TBA6 731 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 UROC1Q96N76 676 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 PPP1R10Q96QC0 940 aaKnown RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 TCF25Q9BQ70 676 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 FAM213AQ9BRX8 229 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 GTPBP4Q9BZE4 634 aaKnown RBP11.55□□□□□ -0.56
PTCH1-225ENST00000551845 IKZF4Q9H2S9 585 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 PCIF1Q9H4Z3 704 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 ASB7Q9H672 318 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 KIAA1586Q9HCI6 787 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 UBE4BO95155 1302 aa11.55□□□□□ -0.56
PTCH1-225ENST00000551845 ARID2Q68CP9 1835 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 TGFB1I1O43294 461 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 EXTL3O43909 919 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 FAM189A1O60320 539 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 B4GALT3O60512 393 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 B3GAT3O94766 335 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 CSPG5O95196 566 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ADRB2P07550 413 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 CYP3A5P20815 502 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 IRS1P35568 1242 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 NAB2Q15742 525 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 PUS10Q3MIT2 529 aaKnown RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 KIAA1841Q6NSI8 718 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 TMEM173Q86WV6 379 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 GPD1LQ8N335 351 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 MRPL43Q8N983 215 aaKnown RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 KIAA0895Q8NCT3 520 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 NOC3LQ8WTT2 800 aaKnown RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 SAAL1Q96ER3 474 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 KIF12Q96FN5 646 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 CBWD1Q9BRT8 395 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 ADAM28Q9UKQ2 775 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
PTCH1-225ENST00000551845 COL4A6Q14031 1691 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 PTPRSQ13332 1948 aa11.54□□□□□ -0.56
PTCH1-225ENST00000551845 TRANK1O15050 2925 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 LOXHD1Q8IVV2 1947 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 GOLGA8JA6NMD2 632 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 PDXKO00764 312 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 FSCN2O14926 492 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CLIC2O15247 247 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms