RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LTFP02788 710 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CT47B1P0C2W7 299 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CETPP11597 493 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CCL5P13501 91 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 ITGB8P26012 769 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PRDX5P30044 214 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 HIBADHP31937 336 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TRHRP34981 398 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PSMC4P43686 418 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 FNTBP49356 437 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 FLT3LGP49771 235 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 RAB27AP51159 221 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 GALK1P51570 392 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 EPHA5P54756 1037 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SMAD3P84022 425 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 KLF1Q13351 362 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TUSC3Q13454 348 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 LRRC32Q14392 662 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 RAB3GAP1Q15042 981 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SMAD2Q15796 467 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 NFE2Q16621 373 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PTPN21Q16825 1174 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SHROOM1Q2M3G4 852 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TWISTNBQ3B726 338 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 ZNF792Q3KQV3 632 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PAN2Q504Q3 1202 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TIGD5Q53EQ6 642 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PGM2L1Q6PCE3 622 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 Q7L0L9 218 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SIAH1Q8IUQ4 282 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 WDR75Q8IWA0 830 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 WDR63Q8IWG1 891 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 AMOTL1Q8IY63 956 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CHPFQ8IZ52 775 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CLRN3Q8NCR9 226 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TRPV1Q8NER1 839 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 KLHDC4Q8TBB5 520 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CLEC4DQ8WXI8 215 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 DLG3Q92796 817 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 HOOK2Q96ED9 719 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 FUBP3Q96I24 572 aaKnown RBP eCLIP2.91□□□□□ -1.941e-6■■■■■ 31.3
CPSF6-207ENST00000551516 ZDHHC5Q9C0B5 715 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 VTA1Q9NP79 307 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TNFRSF12AQ9NP84 129 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 MBNL3Q9NUK0 354 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 C19orf73Q9NVV2 129 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 C14orf119Q9NWQ9 140 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 MKS1Q9NXB0 559 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 USP36Q9P275 1121 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 MORF4L1Q9UBU8 362 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 FBLN5Q9UBX5 448 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 STAP2Q9UGK3 403 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CPA4Q9UI42 421 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 ADAMTS6Q9UKP5 1117 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PALD1Q9ULE6 856 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SIT1Q9Y3P8 196 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 B3GALT1Q9Y5Z6 326 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 MRFAP1Q9Y605 127 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TRIOO75962 3097 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TNKSO95271 1327 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PDS5AQ29RF7 1337 aaKnown RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 MAPK8IP3Q9UPT6 1336 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 A0A1B0GUL6 1792 aa2.9□□□□□ -1.94
CPSF6-207ENST00000551516 AKAP11Q9UKA4 1901 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 GPR75-ASB3A0A0A6YYF3 556 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ANKRD18BA2A2Z9 1011 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 OR14I1A6ND48 311 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 FAM90A27PA6NNH2 459 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 NUDT19A8MXV4 375 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TCP10L2B9ZVM9 353 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ABLIM1O14639 778 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 AKAP10O43572 662 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 KDM1AO60341 852 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ENTPD3O75355 529 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 MT-CO1P00395 513 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 C4BPAP04003 597 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 FAHP16930 419 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 PTX3P26022 381 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 HOXA7P31268 230 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 GUCY1A2P33402 732 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 IGHMBP2P38935 993 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 SCAND1P57086 179 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ERVFRD-1P60508 538 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ERVK-21P61565 698 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 HERVK_113P62684 666 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 GRIN1Q05586 938 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 EXOSC9Q06265 439 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 DDX10Q13206 875 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 IFIT5Q13325 482 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 SNAPC2Q13487 334 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 MTX1Q13505 466 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 EPHA7Q15375 998 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ABCB5Q2M3G0 1257 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 SLC9C1Q4G0N8 1177 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TREML2Q5T2D2 321 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ADGRF1Q5T601 910 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 OLFML2BQ68BL8 750 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TIGD7Q6NT04 549 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ZC3H14Q6PJT7 736 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 LDHAL6AQ6ZMR3 332 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms